Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:35085178-35197322

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130 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ly6g6f 17 35080480 to 35085610 5130 - protein coding gene lymphocyte antigen 6 complex, locus G6F
Tssr147745 17 35085609 to 35085615 6 - TSS region transcription start site region 147745
Cpgi9080 17 35089076 to 35089755 679 CpG island CpG island 9080
Tssr144225 17 35089229 to 35089307 78 + TSS region transcription start site region 144225
Abhd16a 17 35089263 to 35102987 13724 + protein coding gene abhydrolase domain containing 16A
Tssr144226 17 35108180 to 35108185 5 + TSS region transcription start site region 144226
Tssr144227 17 35108266 to 35108273 7 + TSS region transcription start site region 144227
Tssr144228 17 35108288 to 35108308 20 + TSS region transcription start site region 144228
Ly6g5c 17 35108300 to 35111953 3653 + protein coding gene lymphocyte antigen 6 complex, locus G5C
Tssr144229 17 35110683 to 35110688 5 + TSS region transcription start site region 144229
Tssr144230 17 35110695 to 35110704 9 + TSS region transcription start site region 144230
Tssr144231 17 35110771 to 35110777 6 + TSS region transcription start site region 144231
Tssr147746 17 35112056 to 35112063 7 - TSS region transcription start site region 147746
Tssr147747 17 35112066 to 35112075 9 - TSS region transcription start site region 147747
Ly6g5b 17 35113944 to 35115400 1456 - protein coding gene lymphocyte antigen 6 complex, locus G5B
Tssr147748 17 35115471 to 35115520 49 - TSS region transcription start site region 147748
Tssr147749 17 35115529 to 35115540 11 - TSS region transcription start site region 147749
Tssr147750 17 35115669 to 35115690 21 - TSS region transcription start site region 147750
Csnk2b 17 35116196 to 35122053 5857 - protein coding gene casein kinase 2, beta polypeptide
Tssr147751 17 35117842 to 35117867 25 - TSS region transcription start site region 147751
Tssr147752 17 35118486 to 35118512 26 - TSS region transcription start site region 147752
Tssr147753 17 35118535 to 35118568 33 - TSS region transcription start site region 147753
Tssr147754 17 35118570 to 35118582 12 - TSS region transcription start site region 147754
Tssr147755 17 35120535 to 35120559 24 - TSS region transcription start site region 147755
Cpgi9081 17 35120713 to 35122257 1544 CpG island CpG island 9081
Tssr147756 17 35121059 to 35121078 19 - TSS region transcription start site region 147756
Tssr147757 17 35121186 to 35121197 11 - TSS region transcription start site region 147757
Tssr147758 17 35121213 to 35121275 62 - TSS region transcription start site region 147758
Tssr147759 17 35121352 to 35121368 16 - TSS region transcription start site region 147759
Tssr147760 17 35121398 to 35121409 11 - TSS region transcription start site region 147760
Tssr147761 17 35121423 to 35121434 11 - TSS region transcription start site region 147761
Gpank1 17 35121473 to 35124815 3342 + protein coding gene G patch domain and ankyrin repeats 1
Tssr144232 17 35121515 to 35121577 62 + TSS region transcription start site region 144232
Tssr147762 17 35121990 to 35122039 49 - TSS region transcription start site region 147762
Tssr5101 17 35122728 to 35122732 4 + TSS region transcription start site region 5101
Gm20522 17 35122738 to 35126440 3702 - antisense lncRNA gene predicted gene 20522
Tssr144233 17 35122754 to 35122764 10 + TSS region transcription start site region 144233
Tssr144234 17 35122784 to 35122795 11 + TSS region transcription start site region 144234
Cpgi9082 17 35126075 to 35126665 590 CpG island CpG island 9082
Tssr144235 17 35126316 to 35126423 107 + TSS region transcription start site region 144235
D17H6S53E 17 35126402 to 35128855 2453 + protein coding gene DNA segment, Chr 17, human D6S53E
Tssr144236 17 35126427 to 35126442 15 + TSS region transcription start site region 144236
Tssr144237 17 35128425 to 35128434 9 + TSS region transcription start site region 144237
Apom 17 35128997 to 35131752 2755 - protein coding gene apolipoprotein M
Tssr147763 17 35131763 to 35131785 22 - TSS region transcription start site region 147763
Tssr147764 17 35131790 to 35131807 17 - TSS region transcription start site region 147764
Tssr144238 17 35132163 to 35132170 7 + TSS region transcription start site region 144238
Cpgi9083 17 35134792 to 35136187 1395 CpG island CpG island 9083
Tssr144239 17 35135174 to 35135181 7 + TSS region transcription start site region 144239
Bag6 17 35135178 to 35147322 12144 + protein coding gene BCL2-associated athanogene 6
Tssr144240 17 35135196 to 35135243 47 + TSS region transcription start site region 144240
Tssr147765 17 35135461 to 35135472 11 - TSS region transcription start site region 147765
Tssr144241 17 35135463 to 35135539 76 + TSS region transcription start site region 144241
Tssr144242 17 35135549 to 35135560 11 + TSS region transcription start site region 144242
Tssr144243 17 35135695 to 35135781 86 + TSS region transcription start site region 144243
Tssr144244 17 35135797 to 35135802 5 + TSS region transcription start site region 144244
Tssr144245 17 35135820 to 35135856 36 + TSS region transcription start site region 144245
Tssr144246 17 35135857 to 35135870 13 + TSS region transcription start site region 144246
Tssr144247 17 35135875 to 35135918 43 + TSS region transcription start site region 144247
Tssr144248 17 35135926 to 35135944 18 + TSS region transcription start site region 144248
Tssr144249 17 35136091 to 35136123 32 + TSS region transcription start site region 144249
Tssr144250 17 35136572 to 35136576 4 + TSS region transcription start site region 144250
Tssr144251 17 35138591 to 35138601 10 + TSS region transcription start site region 144251
Tssr144252 17 35140237 to 35140249 12 + TSS region transcription start site region 144252
Tssr144253 17 35140255 to 35140278 23 + TSS region transcription start site region 144253
Tssr144254 17 35140815 to 35140835 20 + TSS region transcription start site region 144254
Tssr144255 17 35142266 to 35142273 7 + TSS region transcription start site region 144255
Tssr144256 17 35142299 to 35142312 13 + TSS region transcription start site region 144256
Prrc2a 17 35149076 to 35164897 15821 - protein coding gene proline-rich coiled-coil 2A
Tssr147766 17 35150565 to 35150579 14 - TSS region transcription start site region 147766
Tssr147767 17 35158035 to 35158047 12 - TSS region transcription start site region 147767
Tssr147768 17 35158439 to 35158455 16 - TSS region transcription start site region 147768
Tssr144257 17 35159046 to 35159097 51 + TSS region transcription start site region 144257
Tssr147769 17 35159153 to 35159198 45 - TSS region transcription start site region 147769
Tssr147770 17 35159393 to 35159410 17 - TSS region transcription start site region 147770
Tssr147771 17 35160795 to 35160835 40 - TSS region transcription start site region 147771
Tssr147772 17 35162313 to 35162337 24 - TSS region transcription start site region 147772
Gm23442 17 35162563 to 35162696 133 - snoRNA gene predicted gene, 23442
Tssr147773 17 35163004 to 35163040 36 - TSS region transcription start site region 147773
Cpgi9084 17 35164210 to 35165436 1226 CpG island CpG island 9084
Tssr147774 17 35164576 to 35164663 87 - TSS region transcription start site region 147774
Tssr147775 17 35164844 to 35164851 7 - TSS region transcription start site region 147775
Tssr147776 17 35164860 to 35164889 29 - TSS region transcription start site region 147776
Tssr147777 17 35164891 to 35164901 10 - TSS region transcription start site region 147777
Tssr147778 17 35165013 to 35165026 13 - TSS region transcription start site region 147778
Gm17705 17 35165119 to 35167186 2067 + lincRNA gene predicted gene, 17705
Tssr147779 17 35165128 to 35165137 9 - TSS region transcription start site region 147779
Tssr147780 17 35165140 to 35165153 13 - TSS region transcription start site region 147780
Tssr147781 17 35165154 to 35165160 6 - TSS region transcription start site region 147781
Tssr147782 17 35165378 to 35165402 24 - TSS region transcription start site region 147782
Tssr144258 17 35170987 to 35170997 10 + TSS region transcription start site region 144258
Aif1 17 35170991 to 35176068 5077 - protein coding gene allograft inflammatory factor 1
Tssr144259 17 35171534 to 35171548 14 + TSS region transcription start site region 144259
Tssr144260 17 35172125 to 35172161 36 + TSS region transcription start site region 144260
Tssr147783 17 35172577 to 35172599 22 - TSS region transcription start site region 147783
Tssr147784 17 35172608 to 35172638 30 - TSS region transcription start site region 147784
Tssr147785 17 35173412 to 35173430 18 - TSS region transcription start site region 147785
Tssr147786 17 35175995 to 35176038 43 - TSS region transcription start site region 147786
Tssr147787 17 35176048 to 35176055 7 - TSS region transcription start site region 147787
Tssr147788 17 35177453 to 35177456 3 - TSS region transcription start site region 147788
Ncr3-ps 17 35180535 to 35184662 4127 + pseudogene natural cytotoxicity triggering receptor 3, pseudogene
Lst1 17 35185095 to 35188439 3344 - protein coding gene leukocyte specific transcript 1
Tssr144261 17 35186862 to 35186912 50 + TSS region transcription start site region 144261
Tssr144262 17 35186934 to 35186974 40 + TSS region transcription start site region 144262
Tssr147789 17 35186965 to 35187006 41 - TSS region transcription start site region 147789
Tssr144263 17 35187956 to 35187964 8 + TSS region transcription start site region 144263
Tssr147790 17 35188427 to 35188446 19 - TSS region transcription start site region 147790
Tssr147791 17 35190234 to 35190258 24 - TSS region transcription start site region 147791
Tssr144264 17 35190356 to 35190377 21 + TSS region transcription start site region 144264
Cpgi9085 17 35193966 to 35194227 261 CpG island CpG island 9085
Tssr144265 17 35194142 to 35194155 13 + TSS region transcription start site region 144265
Tssr144266 17 35194324 to 35194339 15 + TSS region transcription start site region 144266
Tssr144267 17 35194405 to 35194421 16 + TSS region transcription start site region 144267
Tssr144268 17 35194502 to 35194521 19 + TSS region transcription start site region 144268
Ltb 17 35194507 to 35196305 1798 + protein coding gene lymphotoxin B
Tssr144269 17 35194597 to 35194602 5 + TSS region transcription start site region 144269
Tssr144270 17 35194891 to 35194909 18 + TSS region transcription start site region 144270
Tssr144271 17 35194910 to 35194923 13 + TSS region transcription start site region 144271
Mir6973a 17 35194972 to 35195049 77 + miRNA gene microRNA 6973a
Tssr144272 17 35195020 to 35195039 19 + TSS region transcription start site region 144272
Tssr144273 17 35195040 to 35195050 10 + TSS region transcription start site region 144273
Tssr144274 17 35195052 to 35195068 16 + TSS region transcription start site region 144274
Tssr144275 17 35195078 to 35195089 11 + TSS region transcription start site region 144275
Tssr144276 17 35195107 to 35195148 41 + TSS region transcription start site region 144276
Cpgi9086 17 35195311 to 35196467 1156 CpG island CpG island 9086
Tssr144277 17 35195532 to 35195545 13 + TSS region transcription start site region 144277
Tssr147792 17 35195716 to 35195726 10 - TSS region transcription start site region 147792
Tssr144278 17 35195865 to 35195897 32 + TSS region transcription start site region 144278
Tssr144279 17 35195971 to 35195978 7 + TSS region transcription start site region 144279
Tssr147793 17 35196173 to 35196200 27 - TSS region transcription start site region 147793