Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:35078300-35141953

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ly6g6e 17 35076902 to 35078804 1902 + protein coding gene lymphocyte antigen 6 complex, locus G6E
D17Mit13 17 35079645 to 35079791 146 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 13
Ly6g6f 17 35080480 to 35085610 5130 - protein coding gene lymphocyte antigen 6 complex, locus G6F
Tssr147743 17 35081192 to 35081203 11 - TSS region transcription start site region 147743
Tssr147744 17 35081233 to 35081244 11 - TSS region transcription start site region 147744
Tssr147745 17 35085609 to 35085615 6 - TSS region transcription start site region 147745
Cpgi9080 17 35089076 to 35089755 679 CpG island CpG island 9080
Tssr144225 17 35089229 to 35089307 78 + TSS region transcription start site region 144225
Abhd16a 17 35089263 to 35102987 13724 + protein coding gene abhydrolase domain containing 16A
Tssr144226 17 35108180 to 35108185 5 + TSS region transcription start site region 144226
Tssr144227 17 35108266 to 35108273 7 + TSS region transcription start site region 144227
Tssr144228 17 35108288 to 35108308 20 + TSS region transcription start site region 144228
Ly6g5c 17 35108300 to 35111953 3653 + protein coding gene lymphocyte antigen 6 complex, locus G5C
Tssr144229 17 35110683 to 35110688 5 + TSS region transcription start site region 144229
Tssr144230 17 35110695 to 35110704 9 + TSS region transcription start site region 144230
Tssr144231 17 35110771 to 35110777 6 + TSS region transcription start site region 144231
Tssr147746 17 35112056 to 35112063 7 - TSS region transcription start site region 147746
Tssr147747 17 35112066 to 35112075 9 - TSS region transcription start site region 147747
Ly6g5b 17 35113944 to 35115400 1456 - protein coding gene lymphocyte antigen 6 complex, locus G5B
Tssr147748 17 35115471 to 35115520 49 - TSS region transcription start site region 147748
Tssr147749 17 35115529 to 35115540 11 - TSS region transcription start site region 147749
Tssr147750 17 35115669 to 35115690 21 - TSS region transcription start site region 147750
Csnk2b 17 35116196 to 35122053 5857 - protein coding gene casein kinase 2, beta polypeptide
Tssr147751 17 35117842 to 35117867 25 - TSS region transcription start site region 147751
Tssr147752 17 35118486 to 35118512 26 - TSS region transcription start site region 147752
Tssr147753 17 35118535 to 35118568 33 - TSS region transcription start site region 147753
Tssr147754 17 35118570 to 35118582 12 - TSS region transcription start site region 147754
Tssr147755 17 35120535 to 35120559 24 - TSS region transcription start site region 147755
Cpgi9081 17 35120713 to 35122257 1544 CpG island CpG island 9081
Tssr147756 17 35121059 to 35121078 19 - TSS region transcription start site region 147756
Tssr147757 17 35121186 to 35121197 11 - TSS region transcription start site region 147757
Tssr147758 17 35121213 to 35121275 62 - TSS region transcription start site region 147758
Tssr147759 17 35121352 to 35121368 16 - TSS region transcription start site region 147759
Tssr147760 17 35121398 to 35121409 11 - TSS region transcription start site region 147760
Tssr147761 17 35121423 to 35121434 11 - TSS region transcription start site region 147761
Gpank1 17 35121473 to 35124815 3342 + protein coding gene G patch domain and ankyrin repeats 1
Tssr144232 17 35121515 to 35121577 62 + TSS region transcription start site region 144232
Tssr147762 17 35121990 to 35122039 49 - TSS region transcription start site region 147762
Tssr5101 17 35122728 to 35122732 4 + TSS region transcription start site region 5101
Gm20522 17 35122738 to 35126440 3702 - antisense lncRNA gene predicted gene 20522
Tssr144233 17 35122754 to 35122764 10 + TSS region transcription start site region 144233
Tssr144234 17 35122784 to 35122795 11 + TSS region transcription start site region 144234
Cpgi9082 17 35126075 to 35126665 590 CpG island CpG island 9082
Tssr144235 17 35126316 to 35126423 107 + TSS region transcription start site region 144235
D17H6S53E 17 35126402 to 35128855 2453 + protein coding gene DNA segment, Chr 17, human D6S53E
Tssr144236 17 35126427 to 35126442 15 + TSS region transcription start site region 144236
Tssr144237 17 35128425 to 35128434 9 + TSS region transcription start site region 144237
Apom 17 35128997 to 35131752 2755 - protein coding gene apolipoprotein M
Tssr147763 17 35131763 to 35131785 22 - TSS region transcription start site region 147763
Tssr147764 17 35131790 to 35131807 17 - TSS region transcription start site region 147764
Tssr144238 17 35132163 to 35132170 7 + TSS region transcription start site region 144238
Cpgi9083 17 35134792 to 35136187 1395 CpG island CpG island 9083
Tssr144239 17 35135174 to 35135181 7 + TSS region transcription start site region 144239
Bag6 17 35135178 to 35147322 12144 + protein coding gene BCL2-associated athanogene 6
Tssr144240 17 35135196 to 35135243 47 + TSS region transcription start site region 144240
Tssr147765 17 35135461 to 35135472 11 - TSS region transcription start site region 147765
Tssr144241 17 35135463 to 35135539 76 + TSS region transcription start site region 144241
Tssr144242 17 35135549 to 35135560 11 + TSS region transcription start site region 144242
Tssr144243 17 35135695 to 35135781 86 + TSS region transcription start site region 144243
Tssr144244 17 35135797 to 35135802 5 + TSS region transcription start site region 144244
Tssr144245 17 35135820 to 35135856 36 + TSS region transcription start site region 144245
Tssr144246 17 35135857 to 35135870 13 + TSS region transcription start site region 144246
Tssr144247 17 35135875 to 35135918 43 + TSS region transcription start site region 144247
Tssr144248 17 35135926 to 35135944 18 + TSS region transcription start site region 144248
Tssr144249 17 35136091 to 35136123 32 + TSS region transcription start site region 144249
Tssr144250 17 35136572 to 35136576 4 + TSS region transcription start site region 144250
Tssr144251 17 35138591 to 35138601 10 + TSS region transcription start site region 144251
Tssr144252 17 35140237 to 35140249 12 + TSS region transcription start site region 144252
Tssr144253 17 35140255 to 35140278 23 + TSS region transcription start site region 144253
Tssr144254 17 35140815 to 35140835 20 + TSS region transcription start site region 144254