Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:35045434-35076106

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Msh5 17 35028605 to 35046745 18140 - protein coding gene mutS homolog 5
Cpgi9073 17 35046039 to 35047046 1007 CpG island CpG island 9073
Tssr147727 17 35046448 to 35046459 11 - TSS region transcription start site region 147727
Tssr147728 17 35046501 to 35046514 13 - TSS region transcription start site region 147728
Tssr147729 17 35046539 to 35046559 20 - TSS region transcription start site region 147729
Tssr147730 17 35046737 to 35046763 26 - TSS region transcription start site region 147730
Tssr144177 17 35046900 to 35046940 40 + TSS region transcription start site region 144177
Tssr147731 17 35047739 to 35047743 4 - TSS region transcription start site region 147731
Tssr147732 17 35048433 to 35048452 19 - TSS region transcription start site region 147732
Tssr147733 17 35048468 to 35048483 15 - TSS region transcription start site region 147733
Tssr147734 17 35048496 to 35048507 11 - TSS region transcription start site region 147734
Tssr144178 17 35048567 to 35048587 20 + TSS region transcription start site region 144178
Gm23421 17 35049218 to 35049321 103 + snRNA gene predicted gene, 23421
Tssr144179 17 35049724 to 35049753 29 + TSS region transcription start site region 144179
Cpgi9074 17 35050074 to 35050507 433 CpG island CpG island 9074
Tssr144180 17 35050125 to 35050127 2 + TSS region transcription start site region 144180
Tssr144181 17 35050197 to 35050211 14 + TSS region transcription start site region 144181
Tssr144182 17 35050221 to 35050239 18 + TSS region transcription start site region 144182
Clic1 17 35050243 to 35058719 8476 + protein coding gene chloride intracellular channel 1
Tssr144183 17 35050245 to 35050272 27 + TSS region transcription start site region 144183
Tssr144184 17 35050284 to 35050291 7 + TSS region transcription start site region 144184
Tssr144185 17 35050304 to 35050315 11 + TSS region transcription start site region 144185
Tssr144186 17 35050397 to 35050450 53 + TSS region transcription start site region 144186
Tssr144187 17 35050627 to 35050647 20 + TSS region transcription start site region 144187
Tssr147735 17 35051266 to 35051296 30 - TSS region transcription start site region 147735
Cpgi9075 17 35051356 to 35051598 242 CpG island CpG island 9075
Tssr144188 17 35051457 to 35051509 52 + TSS region transcription start site region 144188
Tssr147736 17 35051825 to 35051847 22 - TSS region transcription start site region 147736
Tssr144189 17 35052481 to 35052515 34 + TSS region transcription start site region 144189
Tssr144190 17 35052605 to 35052634 29 + TSS region transcription start site region 144190
Tssr144191 17 35052805 to 35052853 48 + TSS region transcription start site region 144191
Tssr144192 17 35053014 to 35053023 9 + TSS region transcription start site region 144192
Tssr147737 17 35055296 to 35055329 33 - TSS region transcription start site region 147737
Tssr144193 17 35058345 to 35058360 15 + TSS region transcription start site region 144193
Tssr147738 17 35058717 to 35058720 3 - TSS region transcription start site region 147738
Cpgi9076 17 35058895 to 35059939 1044 CpG island CpG island 9076
Ddah2 17 35059035 to 35062095 3060 + protein coding gene dimethylarginine dimethylaminohydrolase 2
Tssr144194 17 35059041 to 35059130 89 + TSS region transcription start site region 144194
Tssr144195 17 35059145 to 35059156 11 + TSS region transcription start site region 144195
Tssr144196 17 35059158 to 35059169 11 + TSS region transcription start site region 144196
Tssr144197 17 35059173 to 35059188 15 + TSS region transcription start site region 144197
Tssr144198 17 35059238 to 35059247 9 + TSS region transcription start site region 144198
Cpgi9077 17 35060434 to 35061106 672 CpG island CpG island 9077
Tssr147739 17 35061491 to 35061497 6 - TSS region transcription start site region 147739
Mpig6b 17 35062693 to 35066184 3491 - protein coding gene megakaryocyte and platelet inhibitory receptor G6b
G6bos 17 35064437 to 35065596 1159 + lncRNA gene G6b opposite strand
Cpgi9078 17 35065243 to 35066176 933 CpG island CpG island 9078
Tssr144199 17 35065339 to 35065366 27 + TSS region transcription start site region 144199
Tssr147740 17 35066171 to 35066189 18 - TSS region transcription start site region 147740
Tssr147741 17 35066194 to 35066205 11 - TSS region transcription start site region 147741
Tssr144200 17 35066865 to 35066887 22 + TSS region transcription start site region 144200
Tssr144201 17 35066901 to 35066910 9 + TSS region transcription start site region 144201
Tssr5100 17 35067110 to 35067119 9 + TSS region transcription start site region 5100
Tssr144202 17 35067124 to 35067136 12 + TSS region transcription start site region 144202
Tssr144203 17 35067317 to 35067332 15 + TSS region transcription start site region 144203
Ly6g6c 17 35067325 to 35070048 2723 + protein coding gene lymphocyte antigen 6 complex, locus G6C
Tssr144204 17 35068694 to 35068712 18 + TSS region transcription start site region 144204
Tssr144205 17 35068721 to 35068750 29 + TSS region transcription start site region 144205
Tssr144206 17 35068822 to 35068831 9 + TSS region transcription start site region 144206
Tssr144207 17 35068859 to 35068885 26 + TSS region transcription start site region 144207
Tssr144208 17 35068904 to 35068922 18 + TSS region transcription start site region 144208
Tssr144209 17 35069325 to 35069343 18 + TSS region transcription start site region 144209
Tssr144210 17 35069372 to 35069386 14 + TSS region transcription start site region 144210
Tssr144211 17 35069402 to 35069416 14 + TSS region transcription start site region 144211
Tssr144212 17 35069437 to 35069442 5 + TSS region transcription start site region 144212
Tssr144213 17 35069450 to 35069472 22 + TSS region transcription start site region 144213
Tssr144214 17 35069477 to 35069505 28 + TSS region transcription start site region 144214
Tssr144215 17 35069543 to 35069557 14 + TSS region transcription start site region 144215
Tssr144216 17 35069581 to 35069590 9 + TSS region transcription start site region 144216
Tssr144217 17 35069616 to 35069627 11 + TSS region transcription start site region 144217
Tssr144218 17 35069690 to 35069722 32 + TSS region transcription start site region 144218
Tssr144219 17 35069723 to 35069749 26 + TSS region transcription start site region 144219
Ly6g6d 17 35071443 to 35078065 6622 - protein coding gene lymphocyte antigen 6 complex, locus G6D
Cpgi9079 17 35074109 to 35074329 220 CpG island CpG island 9079
Tssr147742 17 35074485 to 35074497 12 - TSS region transcription start site region 147742