Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:34979646-35429654

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458 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm10501 17 34976899 to 34981788 4889 - antisense lncRNA gene predicted gene 10501
Cpgi9070 17 34981604 to 34982593 989 CpG island CpG island 9070
Tssr147706 17 34981760 to 34981829 69 - TSS region transcription start site region 147706
Tssr144148 17 34981847 to 34981897 50 + TSS region transcription start site region 144148
Lsm2 17 34981862 to 34985891 4029 + protein coding gene LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
Tssr144149 17 34981898 to 34981940 42 + TSS region transcription start site region 144149
Tssr144150 17 34981947 to 34981948 1 + TSS region transcription start site region 144150
Tssr144151 17 34981952 to 34981986 34 + TSS region transcription start site region 144151
Tssr144152 17 34982022 to 34982034 12 + TSS region transcription start site region 144152
Tssr144153 17 34982099 to 34982151 52 + TSS region transcription start site region 144153
Tssr144154 17 34982154 to 34982168 14 + TSS region transcription start site region 144154
Tssr147707 17 34982477 to 34982491 14 - TSS region transcription start site region 147707
Tssr144155 17 34982586 to 34982652 66 + TSS region transcription start site region 144155
Tssr144156 17 34985533 to 34985567 34 + TSS region transcription start site region 144156
D17H6S56E-5 17 34996678 to 35000746 4068 - protein coding gene DNA segment, Chr 17, human D6S56E 5
Igis1 17 34996678 to 35026741 30063 heritable phenotypic marker immunoglobulin isotype 1
Tssr147708 17 34998678 to 34998718 40 - TSS region transcription start site region 147708
Tssr144157 17 34998743 to 34998756 13 + TSS region transcription start site region 144157
Tssr147709 17 34999234 to 34999255 21 - TSS region transcription start site region 147709
Tssr147710 17 34999309 to 34999341 32 - TSS region transcription start site region 147710
Tssr147711 17 34999436 to 34999449 13 - TSS region transcription start site region 147711
Cpgi9071 17 34999973 to 35000176 203 CpG island CpG island 9071
Tssr147712 17 35000027 to 35000037 10 - TSS region transcription start site region 147712
Tssr147713 17 35000368 to 35000411 43 - TSS region transcription start site region 147713
Cpgi9072 17 35000729 to 35001848 1119 CpG island CpG island 9072
Tssr147714 17 35000777 to 35000801 24 - TSS region transcription start site region 147714
Tssr147715 17 35000808 to 35000836 28 - TSS region transcription start site region 147715
Tssr147716 17 35000848 to 35000857 9 - TSS region transcription start site region 147716
Tssr144158 17 35000902 to 35000930 28 + TSS region transcription start site region 144158
Tssr144159 17 35000933 to 35000944 11 + TSS region transcription start site region 144159
Tssr144160 17 35000946 to 35000962 16 + TSS region transcription start site region 144160
Tssr144161 17 35000965 to 35000976 11 + TSS region transcription start site region 144161
Vars 17 35000987 to 35016322 15335 + protein coding gene valyl-tRNA synthetase
Tssr144162 17 35001023 to 35001097 74 + TSS region transcription start site region 144162
Tssr144163 17 35001098 to 35001161 63 + TSS region transcription start site region 144163
Tssr144164 17 35001282 to 35001347 65 + TSS region transcription start site region 144164
Tssr144165 17 35001349 to 35001371 22 + TSS region transcription start site region 144165
Tssr144166 17 35001380 to 35001423 43 + TSS region transcription start site region 144166
Tssr144167 17 35001568 to 35001582 14 + TSS region transcription start site region 144167
Tssr147717 17 35001942 to 35001960 18 - TSS region transcription start site region 147717
D17Nki5 17 35001985 to 35002164 179 DNA segment DNA segment, Chr 17, Netherlands Cancer Institute 5
Tssr147718 17 35002578 to 35002590 12 - TSS region transcription start site region 147718
D17Nki6 17 35003051 to 35003228 177 DNA segment DNA segment, Chr 17, Netherlands Cancer Institute 6
Tssr144168 17 35004681 to 35004690 9 + TSS region transcription start site region 144168
Tssr144169 17 35004695 to 35004728 33 + TSS region transcription start site region 144169
Tssr144170 17 35016518 to 35016546 28 + TSS region transcription start site region 144170
Tssr144171 17 35016576 to 35016604 28 + TSS region transcription start site region 144171
Vwa7 17 35016579 to 35026741 10162 + protein coding gene von Willebrand factor A domain containing 7
Tssr144172 17 35024107 to 35024113 6 + TSS region transcription start site region 144172
Tssr144173 17 35024136 to 35024145 9 + TSS region transcription start site region 144173
Tssr144174 17 35024362 to 35024376 14 + TSS region transcription start site region 144174
Sapcd1 17 35025959 to 35028016 2057 - protein coding gene suppressor APC domain containing 1
Tssr144175 17 35027537 to 35027547 10 + TSS region transcription start site region 144175
Tssr147719 17 35027634 to 35027647 13 - TSS region transcription start site region 147719
Tssr147720 17 35027648 to 35027657 9 - TSS region transcription start site region 147720
Tssr147721 17 35027665 to 35027673 8 - TSS region transcription start site region 147721
Tssr147722 17 35027856 to 35027868 12 - TSS region transcription start site region 147722
Tssr147723 17 35027878 to 35027895 17 - TSS region transcription start site region 147723
Tssr147724 17 35027909 to 35027934 25 - TSS region transcription start site region 147724
Msh5 17 35028605 to 35046745 18140 - protein coding gene mutS homolog 5
Tssr147725 17 35029840 to 35029870 30 - TSS region transcription start site region 147725
Tssr147726 17 35029877 to 35029889 12 - TSS region transcription start site region 147726
Tssr144176 17 35045121 to 35045137 16 + TSS region transcription start site region 144176
Cpgi9073 17 35046039 to 35047046 1007 CpG island CpG island 9073
Tssr147727 17 35046448 to 35046459 11 - TSS region transcription start site region 147727
Tssr147728 17 35046501 to 35046514 13 - TSS region transcription start site region 147728
Tssr147729 17 35046539 to 35046559 20 - TSS region transcription start site region 147729
Tssr147730 17 35046737 to 35046763 26 - TSS region transcription start site region 147730
Tssr144177 17 35046900 to 35046940 40 + TSS region transcription start site region 144177
Tssr147731 17 35047739 to 35047743 4 - TSS region transcription start site region 147731
Tssr147732 17 35048433 to 35048452 19 - TSS region transcription start site region 147732
Tssr147733 17 35048468 to 35048483 15 - TSS region transcription start site region 147733
Tssr147734 17 35048496 to 35048507 11 - TSS region transcription start site region 147734
Tssr144178 17 35048567 to 35048587 20 + TSS region transcription start site region 144178
Gm23421 17 35049218 to 35049321 103 + snRNA gene predicted gene, 23421
Tssr144179 17 35049724 to 35049753 29 + TSS region transcription start site region 144179
Cpgi9074 17 35050074 to 35050507 433 CpG island CpG island 9074
Tssr144180 17 35050125 to 35050127 2 + TSS region transcription start site region 144180
Tssr144181 17 35050197 to 35050211 14 + TSS region transcription start site region 144181
Tssr144182 17 35050221 to 35050239 18 + TSS region transcription start site region 144182
Clic1 17 35050243 to 35058719 8476 + protein coding gene chloride intracellular channel 1
Tssr144183 17 35050245 to 35050272 27 + TSS region transcription start site region 144183
Tssr144184 17 35050284 to 35050291 7 + TSS region transcription start site region 144184
Tssr144185 17 35050304 to 35050315 11 + TSS region transcription start site region 144185
Tssr144186 17 35050397 to 35050450 53 + TSS region transcription start site region 144186
Tssr144187 17 35050627 to 35050647 20 + TSS region transcription start site region 144187
Tssr147735 17 35051266 to 35051296 30 - TSS region transcription start site region 147735
Cpgi9075 17 35051356 to 35051598 242 CpG island CpG island 9075
Tssr144188 17 35051457 to 35051509 52 + TSS region transcription start site region 144188
Tssr147736 17 35051825 to 35051847 22 - TSS region transcription start site region 147736
Tssr144189 17 35052481 to 35052515 34 + TSS region transcription start site region 144189
Tssr144190 17 35052605 to 35052634 29 + TSS region transcription start site region 144190
Tssr144191 17 35052805 to 35052853 48 + TSS region transcription start site region 144191
Tssr144192 17 35053014 to 35053023 9 + TSS region transcription start site region 144192
Tssr147737 17 35055296 to 35055329 33 - TSS region transcription start site region 147737
Tssr144193 17 35058345 to 35058360 15 + TSS region transcription start site region 144193
Tssr147738 17 35058717 to 35058720 3 - TSS region transcription start site region 147738
Cpgi9076 17 35058895 to 35059939 1044 CpG island CpG island 9076
Ddah2 17 35059035 to 35062095 3060 + protein coding gene dimethylarginine dimethylaminohydrolase 2
Tssr144194 17 35059041 to 35059130 89 + TSS region transcription start site region 144194
Tssr144195 17 35059145 to 35059156 11 + TSS region transcription start site region 144195
Tssr144196 17 35059158 to 35059169 11 + TSS region transcription start site region 144196
Tssr144197 17 35059173 to 35059188 15 + TSS region transcription start site region 144197
Tssr144198 17 35059238 to 35059247 9 + TSS region transcription start site region 144198
Cpgi9077 17 35060434 to 35061106 672 CpG island CpG island 9077
Tssr147739 17 35061491 to 35061497 6 - TSS region transcription start site region 147739
Mpig6b 17 35062693 to 35066184 3491 - protein coding gene megakaryocyte and platelet inhibitory receptor G6b
G6bos 17 35064437 to 35065596 1159 + lncRNA gene G6b opposite strand
Cpgi9078 17 35065243 to 35066176 933 CpG island CpG island 9078
Tssr144199 17 35065339 to 35065366 27 + TSS region transcription start site region 144199
Tssr147740 17 35066171 to 35066189 18 - TSS region transcription start site region 147740
Tssr147741 17 35066194 to 35066205 11 - TSS region transcription start site region 147741
Tssr144200 17 35066865 to 35066887 22 + TSS region transcription start site region 144200
Tssr144201 17 35066901 to 35066910 9 + TSS region transcription start site region 144201
Tssr5100 17 35067110 to 35067119 9 + TSS region transcription start site region 5100
Tssr144202 17 35067124 to 35067136 12 + TSS region transcription start site region 144202
Tssr144203 17 35067317 to 35067332 15 + TSS region transcription start site region 144203
Ly6g6c 17 35067325 to 35070048 2723 + protein coding gene lymphocyte antigen 6 complex, locus G6C
Tssr144204 17 35068694 to 35068712 18 + TSS region transcription start site region 144204
Tssr144205 17 35068721 to 35068750 29 + TSS region transcription start site region 144205
Tssr144206 17 35068822 to 35068831 9 + TSS region transcription start site region 144206
Tssr144207 17 35068859 to 35068885 26 + TSS region transcription start site region 144207
Tssr144208 17 35068904 to 35068922 18 + TSS region transcription start site region 144208
Tssr144209 17 35069325 to 35069343 18 + TSS region transcription start site region 144209
Tssr144210 17 35069372 to 35069386 14 + TSS region transcription start site region 144210
Tssr144211 17 35069402 to 35069416 14 + TSS region transcription start site region 144211
Tssr144212 17 35069437 to 35069442 5 + TSS region transcription start site region 144212
Tssr144213 17 35069450 to 35069472 22 + TSS region transcription start site region 144213
Tssr144214 17 35069477 to 35069505 28 + TSS region transcription start site region 144214
Tssr144215 17 35069543 to 35069557 14 + TSS region transcription start site region 144215
Tssr144216 17 35069581 to 35069590 9 + TSS region transcription start site region 144216
Tssr144217 17 35069616 to 35069627 11 + TSS region transcription start site region 144217
Tssr144218 17 35069690 to 35069722 32 + TSS region transcription start site region 144218
Tssr144219 17 35069723 to 35069749 26 + TSS region transcription start site region 144219
Ly6g6d 17 35071443 to 35078065 6622 - protein coding gene lymphocyte antigen 6 complex, locus G6D
Cpgi9079 17 35074109 to 35074329 220 CpG island CpG island 9079
Tssr147742 17 35074485 to 35074497 12 - TSS region transcription start site region 147742
Tssr144220 17 35076873 to 35076915 42 + TSS region transcription start site region 144220
Ly6g6e 17 35076902 to 35078804 1902 + protein coding gene lymphocyte antigen 6 complex, locus G6E
Tssr144221 17 35076918 to 35076931 13 + TSS region transcription start site region 144221
Tssr144222 17 35076933 to 35076961 28 + TSS region transcription start site region 144222
Tssr144223 17 35077060 to 35077073 13 + TSS region transcription start site region 144223
Tssr144224 17 35077080 to 35077153 73 + TSS region transcription start site region 144224
D17Mit13 17 35079645 to 35079791 146 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 13
Ly6g6f 17 35080480 to 35085610 5130 - protein coding gene lymphocyte antigen 6 complex, locus G6F
Tssr147743 17 35081192 to 35081203 11 - TSS region transcription start site region 147743
Tssr147744 17 35081233 to 35081244 11 - TSS region transcription start site region 147744
Tssr147745 17 35085609 to 35085615 6 - TSS region transcription start site region 147745
Cpgi9080 17 35089076 to 35089755 679 CpG island CpG island 9080
Tssr144225 17 35089229 to 35089307 78 + TSS region transcription start site region 144225
Abhd16a 17 35089263 to 35102987 13724 + protein coding gene abhydrolase domain containing 16A
Tssr144226 17 35108180 to 35108185 5 + TSS region transcription start site region 144226
Tssr144227 17 35108266 to 35108273 7 + TSS region transcription start site region 144227
Tssr144228 17 35108288 to 35108308 20 + TSS region transcription start site region 144228
Ly6g5c 17 35108300 to 35111953 3653 + protein coding gene lymphocyte antigen 6 complex, locus G5C
Tssr144229 17 35110683 to 35110688 5 + TSS region transcription start site region 144229
Tssr144230 17 35110695 to 35110704 9 + TSS region transcription start site region 144230
Tssr144231 17 35110771 to 35110777 6 + TSS region transcription start site region 144231
Tssr147746 17 35112056 to 35112063 7 - TSS region transcription start site region 147746
Tssr147747 17 35112066 to 35112075 9 - TSS region transcription start site region 147747
Ly6g5b 17 35113944 to 35115400 1456 - protein coding gene lymphocyte antigen 6 complex, locus G5B
Tssr147748 17 35115471 to 35115520 49 - TSS region transcription start site region 147748
Tssr147749 17 35115529 to 35115540 11 - TSS region transcription start site region 147749
Tssr147750 17 35115669 to 35115690 21 - TSS region transcription start site region 147750
Csnk2b 17 35116196 to 35122053 5857 - protein coding gene casein kinase 2, beta polypeptide
Tssr147751 17 35117842 to 35117867 25 - TSS region transcription start site region 147751
Tssr147752 17 35118486 to 35118512 26 - TSS region transcription start site region 147752
Tssr147753 17 35118535 to 35118568 33 - TSS region transcription start site region 147753
Tssr147754 17 35118570 to 35118582 12 - TSS region transcription start site region 147754
Tssr147755 17 35120535 to 35120559 24 - TSS region transcription start site region 147755
Cpgi9081 17 35120713 to 35122257 1544 CpG island CpG island 9081
Tssr147756 17 35121059 to 35121078 19 - TSS region transcription start site region 147756
Tssr147757 17 35121186 to 35121197 11 - TSS region transcription start site region 147757
Tssr147758 17 35121213 to 35121275 62 - TSS region transcription start site region 147758
Tssr147759 17 35121352 to 35121368 16 - TSS region transcription start site region 147759
Tssr147760 17 35121398 to 35121409 11 - TSS region transcription start site region 147760
Tssr147761 17 35121423 to 35121434 11 - TSS region transcription start site region 147761
Gpank1 17 35121473 to 35124815 3342 + protein coding gene G patch domain and ankyrin repeats 1
Tssr144232 17 35121515 to 35121577 62 + TSS region transcription start site region 144232
Tssr147762 17 35121990 to 35122039 49 - TSS region transcription start site region 147762
Tssr5101 17 35122728 to 35122732 4 + TSS region transcription start site region 5101
Gm20522 17 35122738 to 35126440 3702 - antisense lncRNA gene predicted gene 20522
Tssr144233 17 35122754 to 35122764 10 + TSS region transcription start site region 144233
Tssr144234 17 35122784 to 35122795 11 + TSS region transcription start site region 144234
Cpgi9082 17 35126075 to 35126665 590 CpG island CpG island 9082
Tssr144235 17 35126316 to 35126423 107 + TSS region transcription start site region 144235
D17H6S53E 17 35126402 to 35128855 2453 + protein coding gene DNA segment, Chr 17, human D6S53E
Tssr144236 17 35126427 to 35126442 15 + TSS region transcription start site region 144236
Tssr144237 17 35128425 to 35128434 9 + TSS region transcription start site region 144237
Apom 17 35128997 to 35131752 2755 - protein coding gene apolipoprotein M
Tssr147763 17 35131763 to 35131785 22 - TSS region transcription start site region 147763
Tssr147764 17 35131790 to 35131807 17 - TSS region transcription start site region 147764
Tssr144238 17 35132163 to 35132170 7 + TSS region transcription start site region 144238
Cpgi9083 17 35134792 to 35136187 1395 CpG island CpG island 9083
Tssr144239 17 35135174 to 35135181 7 + TSS region transcription start site region 144239
Bag6 17 35135178 to 35147322 12144 + protein coding gene BCL2-associated athanogene 6
Tssr144240 17 35135196 to 35135243 47 + TSS region transcription start site region 144240
Tssr147765 17 35135461 to 35135472 11 - TSS region transcription start site region 147765
Tssr144241 17 35135463 to 35135539 76 + TSS region transcription start site region 144241
Tssr144242 17 35135549 to 35135560 11 + TSS region transcription start site region 144242