Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:3487785-3627797

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tiam2 17 3326296 to 3519397 193101 + protein coding gene T cell lymphoma invasion and metastasis 2
Tfb1m 17 3519256 to 3557777 38521 - protein coding gene transcription factor B1, mitochondrial
Cldn20 17 3532554 to 3533213 659 + protein coding gene claudin 20
Cpgi8549 17 3557207 to 3557967 760 CpG island CpG island 8549
Tssr142372 17 3557452 to 3557462 10 + TSS region transcription start site region 142372
Tssr142373 17 3557521 to 3557578 57 + TSS region transcription start site region 142373
Tssr146288 17 3557718 to 3557733 15 - TSS region transcription start site region 146288
Tssr146289 17 3557742 to 3557775 33 - TSS region transcription start site region 146289
Tssr146290 17 3557785 to 3557797 12 - TSS region transcription start site region 146290
Tssr146291 17 3557813 to 3557824 11 - TSS region transcription start site region 146291
1700102H20Rik 17 3557824 to 3559862 2038 + lincRNA gene RIKEN cDNA 1700102H20 gene
Tssr4982 17 3557834 to 3557838 4 - TSS region transcription start site region 4982
Tssr142374 17 3557847 to 3557877 30 + TSS region transcription start site region 142374
Tssr142375 17 3558097 to 3558112 15 + TSS region transcription start site region 142375
Gm34155 17 3562349 to 3577325 14976 + lncRNA gene predicted gene, 34155
D17Mit268 17 3618921 to 3619065 144 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology-268