Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:34812004-34952080

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95 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
C4a 17 34809092 to 34823454 14362 - protein coding gene complement component 4A (Rodgers blood group)
Tssr147663 17 34823436 to 34823451 15 - TSS region transcription start site region 147663
Tssr147664 17 34823453 to 34823465 12 - TSS region transcription start site region 147664
D17Mit33b 17 34823586 to 34823726 140 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 33b
Stk19 17 34823993 to 34836903 12910 - protein coding gene serine/threonine kinase 19
Cpgi9057 17 34836238 to 34837703 1465 CpG island CpG island 9057
Tssr147665 17 34836648 to 34836692 44 - TSS region transcription start site region 147665
Tssr147666 17 34836869 to 34836959 90 - TSS region transcription start site region 147666
Tssr144111 17 34836987 to 34837049 62 + TSS region transcription start site region 144111
Dxo 17 34837019 to 34839187 2168 + protein coding gene decapping exoribonuclease
Tssr144112 17 34837054 to 34837077 23 + TSS region transcription start site region 144112
Tssr144113 17 34837082 to 34837166 84 + TSS region transcription start site region 144113
Tssr144114 17 34837172 to 34837192 20 + TSS region transcription start site region 144114
Tssr144115 17 34837244 to 34837294 50 + TSS region transcription start site region 144115
Skiv2l 17 34839226 to 34850204 10978 - protein coding gene superkiller viralicidic activity 2-like (S. cerevisiae)
Tssr147667 17 34839341 to 34839356 15 - TSS region transcription start site region 147667
Tssr147668 17 34839359 to 34839372 13 - TSS region transcription start site region 147668
Tssr147669 17 34839432 to 34839446 14 - TSS region transcription start site region 147669
Mir6971 17 34841809 to 34841871 62 - miRNA gene microRNA 6971
Mir6970 17 34845101 to 34845167 66 - miRNA gene microRNA 6970
Cpgi9058 17 34849726 to 34850888 1162 CpG island CpG island 9058
Tssr144116 17 34849884 to 34849901 17 + TSS region transcription start site region 144116
Tssr147670 17 34850162 to 34850205 43 - TSS region transcription start site region 147670
Tssr147671 17 34850329 to 34850349 20 - TSS region transcription start site region 147671
Tssr144117 17 34850373 to 34850422 49 + TSS region transcription start site region 144117
Nelfe 17 34850391 to 34856372 5981 + protein coding gene negative elongation factor complex member E, Rdbp
Tssr144118 17 34850425 to 34850445 20 + TSS region transcription start site region 144118
Tssr144119 17 34850447 to 34850466 19 + TSS region transcription start site region 144119
Tssr144120 17 34850468 to 34850493 25 + TSS region transcription start site region 144120
Tssr144121 17 34850494 to 34850526 32 + TSS region transcription start site region 144121
Tssr144122 17 34850559 to 34850576 17 + TSS region transcription start site region 144122
Tssr144123 17 34856372 to 34856384 12 + TSS region transcription start site region 144123
Cfb 17 34856374 to 34862514 6140 - protein coding gene complement factor B
Gm20547 17 34856412 to 34882042 25630 - protein coding gene predicted gene 20547
Tssr147672 17 34857028 to 34857043 15 - TSS region transcription start site region 147672
Tssr147673 17 34857079 to 34857093 14 - TSS region transcription start site region 147673
Mir6972 17 34857569 to 34857632 63 - miRNA gene microRNA 6972
Tssr147674 17 34858113 to 34858124 11 - TSS region transcription start site region 147674
Tssr147675 17 34860013 to 34860062 49 - TSS region transcription start site region 147675
Tssr147676 17 34860311 to 34860326 15 - TSS region transcription start site region 147676
Tssr147677 17 34860564 to 34860596 32 - TSS region transcription start site region 147677
Tssr147678 17 34860833 to 34860844 11 - TSS region transcription start site region 147678
Tssr147679 17 34860860 to 34860872 12 - TSS region transcription start site region 147679
Tssr147680 17 34860887 to 34860895 8 - TSS region transcription start site region 147680
Tssr147681 17 34861088 to 34861127 39 - TSS region transcription start site region 147681
Tssr147682 17 34861151 to 34861165 14 - TSS region transcription start site region 147682
Tssr147683 17 34861168 to 34861179 11 - TSS region transcription start site region 147683
Tssr147684 17 34861821 to 34861837 16 - TSS region transcription start site region 147684
Tssr147685 17 34861877 to 34861894 17 - TSS region transcription start site region 147685
Tssr147686 17 34861900 to 34861911 11 - TSS region transcription start site region 147686
Tssr147687 17 34862122 to 34862238 116 - TSS region transcription start site region 147687
Tssr147688 17 34862246 to 34862352 106 - TSS region transcription start site region 147688
Tssr147689 17 34862461 to 34862472 11 - TSS region transcription start site region 147689
Tssr147690 17 34862473 to 34862535 62 - TSS region transcription start site region 147690
C2 17 34862602 to 34882100 19498 - protein coding gene complement component 2 (within H-2S)
Tssr147691 17 34882004 to 34882080 76 - TSS region transcription start site region 147691
Tssr147692 17 34882094 to 34882114 20 - TSS region transcription start site region 147692
Gm40706 17 34892804 to 34895216 2412 - lncRNA gene predicted gene, 40706
Cpgi9059 17 34893880 to 34895633 1753 CpG island CpG island 9059
Tssr144124 17 34894515 to 34894573 58 + TSS region transcription start site region 144124
Zbtb12 17 34894559 to 34897064 2505 + protein coding gene zinc finger and BTB domain containing 12
Tssr144125 17 34894579 to 34894594 15 + TSS region transcription start site region 144125
Tssr144126 17 34894644 to 34894685 41 + TSS region transcription start site region 144126
Tssr144127 17 34894686 to 34894700 14 + TSS region transcription start site region 144127
Tssr147693 17 34895983 to 34895996 13 - TSS region transcription start site region 147693
Tssr144128 17 34896958 to 34896977 19 + TSS region transcription start site region 144128
Cpgi9060 17 34898079 to 34899759 1680 CpG island CpG island 9060
Tssr144129 17 34898276 to 34898315 39 + TSS region transcription start site region 144129
Tssr144130 17 34898463 to 34898501 38 + TSS region transcription start site region 144130
Ehmt2 17 34898469 to 34914052 15583 + protein coding gene euchromatic histone lysine N-methyltransferase 2
Tssr144131 17 34898586 to 34898605 19 + TSS region transcription start site region 144131
Tssr144132 17 34898931 to 34898986 55 + TSS region transcription start site region 144132
Tssr144133 17 34903169 to 34903180 11 + TSS region transcription start site region 144133
Tssr144134 17 34903341 to 34903354 13 + TSS region transcription start site region 144134
Tssr144135 17 34911201 to 34911227 26 + TSS region transcription start site region 144135
Tssr144136 17 34911243 to 34911257 14 + TSS region transcription start site region 144136
Tssr144137 17 34914245 to 34914276 31 + TSS region transcription start site region 144137
Tssr144138 17 34914432 to 34914446 14 + TSS region transcription start site region 144138
Tssr144139 17 34914459 to 34914476 17 + TSS region transcription start site region 144139
Slc44a4 17 34914466 to 34930436 15970 + protein coding gene solute carrier family 44, member 4
Cpgi9061 17 34931045 to 34932152 1107 CpG island CpG island 9061
Neu1 17 34931253 to 34935953 4700 + protein coding gene neuraminidase 1
Tssr144140 17 34931331 to 34931343 12 + TSS region transcription start site region 144140
Tssr144141 17 34931348 to 34931384 36 + TSS region transcription start site region 144141
Tssr144142 17 34931904 to 34931937 33 + TSS region transcription start site region 144142
Cpgi9062 17 34934009 to 34934922 913 CpG island CpG island 9062
Tssr144143 17 34934059 to 34934079 20 + TSS region transcription start site region 144143
D17Nki1 17 34946744 to 34947028 284 DNA segment DNA segment, Chr 17, Netherlands Cancer Institute 1
D17Nki2 17 34947008 to 34947219 211 DNA segment DNA segment, Chr 17, Netherlands Cancer Institute 2
1110038B12Rik 17 34950238 to 34952471 2233 - lncRNA gene RIKEN cDNA 1110038B12 gene
Snord52 17 34950950 to 34951008 58 - snoRNA gene small nucleolar RNA, C/D box 52
Tssr147694 17 34951288 to 34951292 4 - TSS region transcription start site region 147694
Cpgi9063 17 34951888 to 34952619 731 CpG island CpG island 9063
Tssr147695 17 34951897 to 34951929 32 - TSS region transcription start site region 147695
Gm25744 17 34952013 to 34952075 62 - snoRNA gene predicted gene, 25744