Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:34643849-34843890

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89 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm20461 17 34640846 to 34643977 3131 - lincRNA gene predicted gene 20461
Tssr144097 17 34643938 to 34643947 9 + TSS region transcription start site region 144097
Tssr144098 17 34643955 to 34643959 4 + TSS region transcription start site region 144098
Tssr144099 17 34643962 to 34643971 9 + TSS region transcription start site region 144099
Cpgi9052 17 34644654 to 34644817 163 CpG island CpG island 9052
Fkbpl 17 34644764 to 34646324 1560 + protein coding gene FK506 binding protein-like
Tssr144100 17 34644781 to 34644797 16 + TSS region transcription start site region 144100
Tssr144101 17 34644805 to 34644870 65 + TSS region transcription start site region 144101
Cpgi9053 17 34646880 to 34647747 867 CpG island CpG island 9053
Tssr144102 17 34647121 to 34647122 1 + TSS region transcription start site region 144102
Tssr144103 17 34647128 to 34647173 45 + TSS region transcription start site region 144103
Atf6b 17 34647146 to 34655074 7928 + protein coding gene activating transcription factor 6 beta
Tssr144104 17 34647187 to 34647216 29 + TSS region transcription start site region 144104
Tssr144105 17 34647649 to 34647679 30 + TSS region transcription start site region 144105
Tssr144106 17 34648239 to 34648271 32 + TSS region transcription start site region 144106
Tssr147632 17 34659483 to 34659485 2 - TSS region transcription start site region 147632
Tssr144107 17 34660457 to 34660516 59 + TSS region transcription start site region 144107
Tssr144108 17 34661610 to 34661617 7 + TSS region transcription start site region 144108
Tssr144109 17 34661652 to 34661661 9 + TSS region transcription start site region 144109
Tnxb 17 34670535 to 34719815 49280 + protein coding gene tenascin XB
Cpgi9054 17 34671007 to 34672943 1936 CpG island CpG island 9054
Cpgi9055 17 34679932 to 34680690 758 CpG island CpG island 9055
Cpgi9056 17 34681118 to 34681363 245 CpG island CpG island 9056
Tssr144110 17 34681404 to 34681416 12 + TSS region transcription start site region 144110
Gm24389 17 34687696 to 34687802 106 - snRNA gene predicted gene, 24389
Cyp21a2-ps 17 34719813 to 34722252 2439 - pseudogene cytochrome P450, family 21, subfamily a, polypeptide 2 pseudogene
Tssr5096 17 34722382 to 34722389 7 - TSS region transcription start site region 5096
Tssr147633 17 34722408 to 34722421 13 - TSS region transcription start site region 147633
C4b 17 34728380 to 34743882 15502 - protein coding gene complement component 4B (Chido blood group)
Tssr147634 17 34729387 to 34729397 10 - TSS region transcription start site region 147634
Tssr147635 17 34729880 to 34729904 24 - TSS region transcription start site region 147635
Tssr147636 17 34729982 to 34730016 34 - TSS region transcription start site region 147636
Tssr147637 17 34739988 to 34740005 17 - TSS region transcription start site region 147637
Tssr147638 17 34740260 to 34740275 15 - TSS region transcription start site region 147638
Tssr147639 17 34743849 to 34743890 41 - TSS region transcription start site region 147639
D17Mit33a 17 34744007 to 34744199 192 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 33a
D17Mit31 17 34744039 to 34744199 160 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 31
D17Mit32 17 34744048 to 34744197 149 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 32
D17Mit34 17 34744053 to 34744199 146 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 34
Stk19-ps1 17 34744753 to 34747154 2401 - pseudogene serine/threonine kinase 19, pseudogene 1
Skiv2l-ps1 17 34769833 to 34771228 1395 - pseudogene superkiller viralicidic activity 2-like (S. cerevisiae), pseudogene 1
Gm27471 17 34770579 to 34770645 66 - miRNA gene predicted gene, 27471
Tnxa 17 34776555 to 34801623 25068 + pseudogene tenascin XA (pseudogene)
Cyp21a1 17 34801348 to 34804426 3078 - protein coding gene cytochrome P450, family 21, subfamily a, polypeptide 1
Tssr147640 17 34801373 to 34801391 18 - TSS region transcription start site region 147640
Tssr147641 17 34801419 to 34801455 36 - TSS region transcription start site region 147641
Tssr147642 17 34801754 to 34801759 5 - TSS region transcription start site region 147642
Tssr147643 17 34801761 to 34801773 12 - TSS region transcription start site region 147643
Tssr147644 17 34801786 to 34801797 11 - TSS region transcription start site region 147644
Tssr147645 17 34801888 to 34801904 16 - TSS region transcription start site region 147645
Tssr147646 17 34802474 to 34802476 2 - TSS region transcription start site region 147646
Tssr147647 17 34803009 to 34803026 17 - TSS region transcription start site region 147647
Tssr147648 17 34803032 to 34803054 22 - TSS region transcription start site region 147648
Tssr147649 17 34803063 to 34803072 9 - TSS region transcription start site region 147649
Tssr147650 17 34803485 to 34803496 11 - TSS region transcription start site region 147650
Tssr147651 17 34803497 to 34803512 15 - TSS region transcription start site region 147651
Tssr147652 17 34803941 to 34803955 14 - TSS region transcription start site region 147652
Tssr147653 17 34804064 to 34804078 14 - TSS region transcription start site region 147653
Tssr147654 17 34804088 to 34804099 11 - TSS region transcription start site region 147654
Tssr147655 17 34804116 to 34804127 11 - TSS region transcription start site region 147655
Tssr5097 17 34804308 to 34804325 17 - TSS region transcription start site region 5097
Tssr147656 17 34804331 to 34804343 12 - TSS region transcription start site region 147656
Tssr5098 17 34804403 to 34804410 7 - TSS region transcription start site region 5098
Tssr5099 17 34804465 to 34804474 9 - TSS region transcription start site region 5099
Tssr147657 17 34804482 to 34804491 9 - TSS region transcription start site region 147657
Tssr147658 17 34804514 to 34804537 23 - TSS region transcription start site region 147658
Tssr147659 17 34804546 to 34804568 22 - TSS region transcription start site region 147659
C4a 17 34809092 to 34823454 14362 - protein coding gene complement component 4A (Rodgers blood group)
Tssr147660 17 34810088 to 34810109 21 - TSS region transcription start site region 147660
Tssr147661 17 34810557 to 34810596 39 - TSS region transcription start site region 147661
Tssr147662 17 34810676 to 34810710 34 - TSS region transcription start site region 147662
Tssr147663 17 34823436 to 34823451 15 - TSS region transcription start site region 147663
Tssr147664 17 34823453 to 34823465 12 - TSS region transcription start site region 147664
D17Mit33b 17 34823586 to 34823726 140 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 33b
Stk19 17 34823993 to 34836903 12910 - protein coding gene serine/threonine kinase 19
Cpgi9057 17 34836238 to 34837703 1465 CpG island CpG island 9057
Tssr147665 17 34836648 to 34836692 44 - TSS region transcription start site region 147665
Tssr147666 17 34836869 to 34836959 90 - TSS region transcription start site region 147666
Tssr144111 17 34836987 to 34837049 62 + TSS region transcription start site region 144111
Dxo 17 34837019 to 34839187 2168 + protein coding gene decapping exoribonuclease
Tssr144112 17 34837054 to 34837077 23 + TSS region transcription start site region 144112
Tssr144113 17 34837082 to 34837166 84 + TSS region transcription start site region 144113
Tssr144114 17 34837172 to 34837192 20 + TSS region transcription start site region 144114
Tssr144115 17 34837244 to 34837294 50 + TSS region transcription start site region 144115
Skiv2l 17 34839226 to 34850204 10978 - protein coding gene superkiller viralicidic activity 2-like (S. cerevisiae)
Tssr147667 17 34839341 to 34839356 15 - TSS region transcription start site region 147667
Tssr147668 17 34839359 to 34839372 13 - TSS region transcription start site region 147668
Tssr147669 17 34839432 to 34839446 14 - TSS region transcription start site region 147669
Mir6971 17 34841809 to 34841871 62 - miRNA gene microRNA 6971