Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:34597729-34627762

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr144058 17 34597852 to 34597868 16 + TSS region transcription start site region 144058
Ager 17 34597862 to 34600936 3074 + protein coding gene advanced glycosylation end product-specific receptor
Tssr144059 17 34598152 to 34598164 12 + TSS region transcription start site region 144059
Tssr144060 17 34598443 to 34598450 7 + TSS region transcription start site region 144060
Rnf5 17 34601099 to 34603561 2462 - protein coding gene ring finger protein 5
Gm20463 17 34601151 to 34601576 425 + antisense lncRNA gene predicted gene 20463
Cpgi9046 17 34603253 to 34603646 393 CpG island CpG island 9046
Tssr147602 17 34603399 to 34603410 11 - TSS region transcription start site region 147602
Tssr147603 17 34603477 to 34603488 11 - TSS region transcription start site region 147603
Tssr147604 17 34603522 to 34603626 104 - TSS region transcription start site region 147604
Tssr147605 17 34603675 to 34603702 27 - TSS region transcription start site region 147605
Tssr147606 17 34603709 to 34603724 15 - TSS region transcription start site region 147606
Tssr147607 17 34603738 to 34603749 11 - TSS region transcription start site region 147607
Cpgi9047 17 34603960 to 34604697 737 CpG island CpG island 9047
Tssr144061 17 34604184 to 34604195 11 + TSS region transcription start site region 144061
Tssr144062 17 34604286 to 34604304 18 + TSS region transcription start site region 144062
Agpat1 17 34604303 to 34613449 9146 + protein coding gene 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
Tssr144063 17 34604783 to 34604790 7 + TSS region transcription start site region 144063
Tssr144064 17 34604795 to 34604809 14 + TSS region transcription start site region 144064
Tssr144065 17 34604819 to 34604856 37 + TSS region transcription start site region 144065
Tssr144066 17 34604884 to 34604921 37 + TSS region transcription start site region 144066
Tssr144067 17 34604929 to 34604951 22 + TSS region transcription start site region 144067
Tssr144068 17 34605443 to 34605476 33 + TSS region transcription start site region 144068
Tssr144069 17 34605489 to 34605498 9 + TSS region transcription start site region 144069
Cpgi9048 17 34605518 to 34606447 929 CpG island CpG island 9048
Tssr147608 17 34605717 to 34605731 14 - TSS region transcription start site region 147608
Tssr147609 17 34605747 to 34605765 18 - TSS region transcription start site region 147609
Tssr144070 17 34605855 to 34605862 7 + TSS region transcription start site region 144070
Tssr144071 17 34605864 to 34605881 17 + TSS region transcription start site region 144071
Tssr144072 17 34605899 to 34605939 40 + TSS region transcription start site region 144072
Tssr147610 17 34606345 to 34606359 14 - TSS region transcription start site region 147610
Tssr147611 17 34606649 to 34606662 13 - TSS region transcription start site region 147611
Tssr147612 17 34606907 to 34606923 16 - TSS region transcription start site region 147612
Tssr144073 17 34608979 to 34608980 1 + TSS region transcription start site region 144073
Tssr144074 17 34608986 to 34608989 3 + TSS region transcription start site region 144074
Tssr144075 17 34608997 to 34609021 24 + TSS region transcription start site region 144075
Tssr144076 17 34610009 to 34610019 10 + TSS region transcription start site region 144076
Tssr144077 17 34610933 to 34610948 15 + TSS region transcription start site region 144077
Tssr144078 17 34611807 to 34611820 13 + TSS region transcription start site region 144078
Tssr144079 17 34612594 to 34612630 36 + TSS region transcription start site region 144079
Tssr144080 17 34612688 to 34612704 16 + TSS region transcription start site region 144080
Tssr144081 17 34612729 to 34612762 33 + TSS region transcription start site region 144081
Tssr144082 17 34613222 to 34613226 4 + TSS region transcription start site region 144082
Egfl8 17 34613349 to 34615971 2622 - protein coding gene EGF-like domain 8
Gm20460 17 34614484 to 34627349 12865 - unclassified non-coding RNA gene predicted gene 20460
Tssr147613 17 34615776 to 34615793 17 - TSS region transcription start site region 147613
Tssr147614 17 34615795 to 34615809 14 - TSS region transcription start site region 147614
Tssr147615 17 34615965 to 34615978 13 - TSS region transcription start site region 147615
Tssr147616 17 34616000 to 34616010 10 - TSS region transcription start site region 147616
Tssr147617 17 34616047 to 34616056 9 - TSS region transcription start site region 147617
Ppt2 17 34616662 to 34628510 11848 - protein coding gene palmitoyl-protein thioesterase 2
Tssr147618 17 34617195 to 34617229 34 - TSS region transcription start site region 147618
Cpgi9049 17 34626679 to 34628314 1635 CpG island CpG island 9049
Tssr147619 17 34627082 to 34627092 10 - TSS region transcription start site region 147619
Tssr147620 17 34627111 to 34627124 13 - TSS region transcription start site region 147620
Tssr147621 17 34627166 to 34627191 25 - TSS region transcription start site region 147621
Tssr147622 17 34627365 to 34627451 86 - TSS region transcription start site region 147622
Tssr144083 17 34627644 to 34627677 33 + TSS region transcription start site region 144083