Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:34596099-34608561

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pbx2 17 34592471 to 34597341 4870 + protein coding gene pre B cell leukemia homeobox 2
Tssr144058 17 34597852 to 34597868 16 + TSS region transcription start site region 144058
Ager 17 34597862 to 34600936 3074 + protein coding gene advanced glycosylation end product-specific receptor
Tssr144059 17 34598152 to 34598164 12 + TSS region transcription start site region 144059
Tssr144060 17 34598443 to 34598450 7 + TSS region transcription start site region 144060
Rnf5 17 34601099 to 34603561 2462 - protein coding gene ring finger protein 5
Gm20463 17 34601151 to 34601576 425 + antisense lncRNA gene predicted gene 20463
Cpgi9046 17 34603253 to 34603646 393 CpG island CpG island 9046
Tssr147602 17 34603399 to 34603410 11 - TSS region transcription start site region 147602
Tssr147603 17 34603477 to 34603488 11 - TSS region transcription start site region 147603
Tssr147604 17 34603522 to 34603626 104 - TSS region transcription start site region 147604
Tssr147605 17 34603675 to 34603702 27 - TSS region transcription start site region 147605
Tssr147606 17 34603709 to 34603724 15 - TSS region transcription start site region 147606
Tssr147607 17 34603738 to 34603749 11 - TSS region transcription start site region 147607
Cpgi9047 17 34603960 to 34604697 737 CpG island CpG island 9047
Tssr144061 17 34604184 to 34604195 11 + TSS region transcription start site region 144061
Tssr144062 17 34604286 to 34604304 18 + TSS region transcription start site region 144062
Agpat1 17 34604303 to 34613449 9146 + protein coding gene 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
Tssr144063 17 34604783 to 34604790 7 + TSS region transcription start site region 144063
Tssr144064 17 34604795 to 34604809 14 + TSS region transcription start site region 144064
Tssr144065 17 34604819 to 34604856 37 + TSS region transcription start site region 144065
Tssr144066 17 34604884 to 34604921 37 + TSS region transcription start site region 144066
Tssr144067 17 34604929 to 34604951 22 + TSS region transcription start site region 144067
Tssr144068 17 34605443 to 34605476 33 + TSS region transcription start site region 144068
Tssr144069 17 34605489 to 34605498 9 + TSS region transcription start site region 144069
Cpgi9048 17 34605518 to 34606447 929 CpG island CpG island 9048
Tssr147608 17 34605717 to 34605731 14 - TSS region transcription start site region 147608
Tssr147609 17 34605747 to 34605765 18 - TSS region transcription start site region 147609
Tssr144070 17 34605855 to 34605862 7 + TSS region transcription start site region 144070
Tssr144071 17 34605864 to 34605881 17 + TSS region transcription start site region 144071
Tssr144072 17 34605899 to 34605939 40 + TSS region transcription start site region 144072
Tssr147610 17 34606345 to 34606359 14 - TSS region transcription start site region 147610
Tssr147611 17 34606649 to 34606662 13 - TSS region transcription start site region 147611
Tssr147612 17 34606907 to 34606923 16 - TSS region transcription start site region 147612