Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:34442804-34582352

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pas19 17 29492190 to 34535463 5043273 QTL pulmonary adenoma susceptibility 19
BC051142 17 34398820 to 34460734 61914 + protein coding gene cDNA sequence BC051142
Tssr144033 17 34459889 to 34459900 11 + TSS region transcription start site region 144033
Tssr5095 17 34460307 to 34460320 13 + TSS region transcription start site region 5095
Btnl4 17 34469042 to 34475937 6895 - protein coding gene butyrophilin-like 4
Tssr147595 17 34477290 to 34477320 30 - TSS region transcription start site region 147595
Gm15332 17 34480763 to 34481119 356 - pseudogene predicted gene 15332
Btnl5-ps 17 34488070 to 34497429 9359 - pseudogene butyrophilin-like 5, pseudogene
Tssr147596 17 34497368 to 34497398 30 - TSS region transcription start site region 147596
Gm15331 17 34501107 to 34501491 384 - pseudogene predicted gene 15331
Btnl6 17 34507935 to 34517352 9417 - protein coding gene butyrophilin-like 6
Tssr147597 17 34518639 to 34518672 33 - TSS region transcription start site region 147597
Gm15329 17 34521750 to 34521904 154 - pseudogene predicted gene 15329
Btnl7-ps 17 34532877 to 34547651 14774 - pseudogene butyrophilin-like 7, pseudogene
D17Mit231 17 34535349 to 34535463 114 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 231
D17Dcr6 17 34535365 to 34535460 95 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 6
Tssr147598 17 34535991 to 34536001 10 - TSS region transcription start site region 147598
Gm31560 17 34543730 to 34557313 13583 + lncRNA gene predicted gene, 31560
Tssr147599 17 34549305 to 34549318 13 - TSS region transcription start site region 147599
Tssr147600 17 34549331 to 34549348 17 - TSS region transcription start site region 147600
Tssr147601 17 34549374 to 34549377 3 - TSS region transcription start site region 147601
Notch4 17 34564268 to 34588503 24235 + protein coding gene notch 4
Tssr144034 17 34564295 to 34564299 4 + TSS region transcription start site region 144034
Tssr144035 17 34564300 to 34564319 19 + TSS region transcription start site region 144035
Tssr144036 17 34564333 to 34564343 10 + TSS region transcription start site region 144036
Tssr144037 17 34564346 to 34564360 14 + TSS region transcription start site region 144037
Tssr144038 17 34564373 to 34564385 12 + TSS region transcription start site region 144038
Gm20462 17 34567730 to 34568137 407 - pseudogene predicted gene 20462
Cpgi9042 17 34572356 to 34572645 289 CpG island CpG island 9042