Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:34272290-34682320

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260 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pas19 17 29492190 to 34535463 5043273 QTL pulmonary adenoma susceptibility 19
Sst6 17 34243234 to 34333707 90473 QTL susceptibility to tuberculosis 6
H2-Aa 17 34282751 to 34287771 5020 - protein coding gene histocompatibility 2, class II antigen A, alpha
Tssr143987 17 34282752 to 34282766 14 + TSS region transcription start site region 143987
Tssr147559 17 34282887 to 34282896 9 - TSS region transcription start site region 147559
Tssr147560 17 34282915 to 34282926 11 - TSS region transcription start site region 147560
Tssr147561 17 34282970 to 34283010 40 - TSS region transcription start site region 147561
Tssr147562 17 34283011 to 34283031 20 - TSS region transcription start site region 147562
Tssr147563 17 34283176 to 34283188 12 - TSS region transcription start site region 147563
Tssr147564 17 34283306 to 34283315 9 - TSS region transcription start site region 147564
Tssr147565 17 34283670 to 34283723 53 - TSS region transcription start site region 147565
Tssr147566 17 34283766 to 34283785 19 - TSS region transcription start site region 147566
Tssr147567 17 34284434 to 34284521 87 - TSS region transcription start site region 147567
Tssr143988 17 34286191 to 34286199 8 + TSS region transcription start site region 143988
Tssr147568 17 34287110 to 34287153 43 - TSS region transcription start site region 147568
Tssr147569 17 34287770 to 34287830 60 - TSS region transcription start site region 147569
Tssr143989 17 34287971 to 34287983 12 + TSS region transcription start site region 143989
Tssr147570 17 34287992 to 34288021 29 - TSS region transcription start site region 147570
Tssr143990 17 34288019 to 34288025 6 + TSS region transcription start site region 143990
Tssr147571 17 34291677 to 34291716 39 - TSS region transcription start site region 147571
Tssr143991 17 34291818 to 34291828 10 + TSS region transcription start site region 143991
Tssr143992 17 34291854 to 34291855 1 + TSS region transcription start site region 143992
Tssr143993 17 34291867 to 34291872 5 + TSS region transcription start site region 143993
Gm20513 17 34293073 to 34305720 12647 - lincRNA gene predicted gene 20513
Tssr147572 17 34293423 to 34293430 7 - TSS region transcription start site region 147572
Tssr147573 17 34293710 to 34293726 16 - TSS region transcription start site region 147573
Tssr143994 17 34293841 to 34293848 7 + TSS region transcription start site region 143994
Tssr143995 17 34293868 to 34293880 12 + TSS region transcription start site region 143995
Tssr143996 17 34293906 to 34293917 11 + TSS region transcription start site region 143996
Tssr143997 17 34293921 to 34293934 13 + TSS region transcription start site region 143997
Tssr147574 17 34296071 to 34296074 3 - TSS region transcription start site region 147574
Tssr147575 17 34296106 to 34296120 14 - TSS region transcription start site region 147575
Tssr147576 17 34296165 to 34296178 13 - TSS region transcription start site region 147576
Tssr143998 17 34299647 to 34299675 28 + TSS region transcription start site region 143998
Tssr143999 17 34300860 to 34300876 16 + TSS region transcription start site region 143999
Tssr147577 17 34301145 to 34301163 18 - TSS region transcription start site region 147577
Tssr147578 17 34301192 to 34301206 14 - TSS region transcription start site region 147578
Tssr144000 17 34301464 to 34301482 18 + TSS region transcription start site region 144000
Tssr147579 17 34304809 to 34304825 16 - TSS region transcription start site region 147579
Tssr147580 17 34304862 to 34304871 9 - TSS region transcription start site region 147580
Tssr144001 17 34305009 to 34305014 5 + TSS region transcription start site region 144001
Tssr144002 17 34305041 to 34305062 21 + TSS region transcription start site region 144002
Tssr144003 17 34305068 to 34305075 7 + TSS region transcription start site region 144003
Tssr147581 17 34305703 to 34305714 11 - TSS region transcription start site region 147581
Tssr147582 17 34305715 to 34305728 13 - TSS region transcription start site region 147582
H2-Eb1 17 34305877 to 34316199 10322 + protein coding gene histocompatibility 2, class II antigen E beta
Tssr144004 17 34305889 to 34305909 20 + TSS region transcription start site region 144004
Tssr144005 17 34305910 to 34305934 24 + TSS region transcription start site region 144005
Tssr144006 17 34306586 to 34306601 15 + TSS region transcription start site region 144006
Tssr144007 17 34306648 to 34306655 7 + TSS region transcription start site region 144007
Tssr144008 17 34306663 to 34306672 9 + TSS region transcription start site region 144008
Tssr144009 17 34306747 to 34306760 13 + TSS region transcription start site region 144009
Tssr144010 17 34307547 to 34307550 3 + TSS region transcription start site region 144010
Cpgi9039 17 34309453 to 34310028 575 CpG island CpG island 9039
Tssr147583 17 34309817 to 34309831 14 - TSS region transcription start site region 147583
Tssr144011 17 34312067 to 34312072 5 + TSS region transcription start site region 144011
Tssr144012 17 34312112 to 34312116 4 + TSS region transcription start site region 144012
Tssr144013 17 34315086 to 34315097 11 + TSS region transcription start site region 144013
Tssr144014 17 34315902 to 34315925 23 + TSS region transcription start site region 144014
Tssr147584 17 34315906 to 34315921 15 - TSS region transcription start site region 147584
Tssr144015 17 34325635 to 34325642 7 + TSS region transcription start site region 144015
Tssr144016 17 34325658 to 34325679 21 + TSS region transcription start site region 144016
H2-Eb2 17 34325665 to 34340229 14564 + protein coding gene histocompatibility 2, class II antigen E beta2
Tssr144017 17 34330051 to 34330066 15 + TSS region transcription start site region 144017
D17Mit22 17 34333549 to 34333707 158 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 22
Gm11140 17 34340877 to 34341409 532 protein coding gene predicted gene 11140
Tssr144018 17 34341952 to 34341959 7 + TSS region transcription start site region 144018
D17Rua10 17 34341956 to 34342190 234 DNA segment DNA segment, Chr 17, Rutgers University 10
Tssr147585 17 34342125 to 34342141 16 - TSS region transcription start site region 147585
H2-Ea-ps 17 34342933 to 34344643 1710 - pseudogene histocompatibility 2, class II antigen E alpha, pseudogene
Tssr147586 17 34342950 to 34342977 27 - TSS region transcription start site region 147586
Tssr147587 17 34342988 to 34343003 15 - TSS region transcription start site region 147587
Tssr147588 17 34343010 to 34343034 24 - TSS region transcription start site region 147588
Tssr147589 17 34343697 to 34343750 53 - TSS region transcription start site region 147589
D17Rua2 17 34344131 to 34344300 169 DNA segment DNA segment, Chr 17, Rutgers University 2
Tssr147590 17 34344186 to 34344191 5 - TSS region transcription start site region 147590
Tssr147591 17 34344557 to 34344594 37 - TSS region transcription start site region 147591
Tssr147592 17 34347659 to 34347678 19 - TSS region transcription start site region 147592
Tssr144019 17 34347801 to 34347805 4 + TSS region transcription start site region 144019
Tssr144020 17 34354787 to 34354836 49 + TSS region transcription start site region 144020
Btnl2 17 34354822 to 34369493 14671 + protein coding gene butyrophilin-like 2
Tssr144021 17 34354842 to 34354865 23 + TSS region transcription start site region 144021
Tssr144022 17 34355233 to 34355251 18 + TSS region transcription start site region 144022
Tssr144023 17 34372271 to 34372278 7 + TSS region transcription start site region 144023
Tssr144024 17 34377124 to 34377154 30 + TSS region transcription start site region 144024
Btnl1 17 34377132 to 34385776 8644 + protein coding gene butyrophilin-like 1
Tssr144025 17 34377160 to 34377177 17 + TSS region transcription start site region 144025
Gm15320 17 34391361 to 34398162 6801 - pseudogene predicted gene 15320
Cpgi9040 17 34392305 to 34392597 292 CpG island CpG island 9040
Tssr144026 17 34392306 to 34392314 8 + TSS region transcription start site region 144026
Gm15321 17 34392403 to 34392690 287 + pseudogene predicted gene 15321
Tssr144027 17 34398802 to 34398830 28 + TSS region transcription start site region 144027
BC051142 17 34398820 to 34460734 61914 + protein coding gene cDNA sequence BC051142
Cpgi9041 17 34398828 to 34399197 369 CpG island CpG island 9041
Tssr144028 17 34398853 to 34398858 5 + TSS region transcription start site region 144028
Tssr144029 17 34399533 to 34399538 5 + TSS region transcription start site region 144029
Tssr147593 17 34416515 to 34416522 7 - TSS region transcription start site region 147593
Tssr144030 17 34417319 to 34417331 12 + TSS region transcription start site region 144030
Tssr144031 17 34417347 to 34417361 14 + TSS region transcription start site region 144031
Tssr147594 17 34420174 to 34420187 13 - TSS region transcription start site region 147594
Tssr144032 17 34434954 to 34434972 18 + TSS region transcription start site region 144032
Tssr144033 17 34459889 to 34459900 11 + TSS region transcription start site region 144033
Tssr5095 17 34460307 to 34460320 13 + TSS region transcription start site region 5095
Btnl4 17 34469042 to 34475937 6895 - protein coding gene butyrophilin-like 4
Tssr147595 17 34477290 to 34477320 30 - TSS region transcription start site region 147595
Gm15332 17 34480763 to 34481119 356 - pseudogene predicted gene 15332
Btnl5-ps 17 34488070 to 34497429 9359 - pseudogene butyrophilin-like 5, pseudogene
Tssr147596 17 34497368 to 34497398 30 - TSS region transcription start site region 147596
Gm15331 17 34501107 to 34501491 384 - pseudogene predicted gene 15331
Btnl6 17 34507935 to 34517352 9417 - protein coding gene butyrophilin-like 6
Tssr147597 17 34518639 to 34518672 33 - TSS region transcription start site region 147597
Gm15329 17 34521750 to 34521904 154 - pseudogene predicted gene 15329
Btnl7-ps 17 34532877 to 34547651 14774 - pseudogene butyrophilin-like 7, pseudogene
D17Mit231 17 34535349 to 34535463 114 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 231
D17Dcr6 17 34535365 to 34535460 95 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 6
Tssr147598 17 34535991 to 34536001 10 - TSS region transcription start site region 147598
Gm31560 17 34543730 to 34557313 13583 + lncRNA gene predicted gene, 31560
Tssr147599 17 34549305 to 34549318 13 - TSS region transcription start site region 147599
Tssr147600 17 34549331 to 34549348 17 - TSS region transcription start site region 147600
Tssr147601 17 34549374 to 34549377 3 - TSS region transcription start site region 147601
Notch4 17 34564268 to 34588503 24235 + protein coding gene notch 4
Tssr144034 17 34564295 to 34564299 4 + TSS region transcription start site region 144034
Tssr144035 17 34564300 to 34564319 19 + TSS region transcription start site region 144035
Tssr144036 17 34564333 to 34564343 10 + TSS region transcription start site region 144036
Tssr144037 17 34564346 to 34564360 14 + TSS region transcription start site region 144037
Tssr144038 17 34564373 to 34564385 12 + TSS region transcription start site region 144038
Gm20462 17 34567730 to 34568137 407 - pseudogene predicted gene 20462
Cpgi9042 17 34572356 to 34572645 289 CpG island CpG island 9042
Cpgi9043 17 34586545 to 34588056 1511 CpG island CpG island 9043
Tssr144039 17 34587642 to 34587679 37 + TSS region transcription start site region 144039
Tssr144040 17 34589799 to 34589830 31 + TSS region transcription start site region 144040
Gpsm3 17 34589806 to 34591754 1948 + protein coding gene G-protein signalling modulator 3 (AGS3-like, C. elegans)
Tssr144041 17 34589832 to 34589913 81 + TSS region transcription start site region 144041
Tssr144042 17 34589914 to 34589928 14 + TSS region transcription start site region 144042
Tssr144043 17 34589954 to 34589965 11 + TSS region transcription start site region 144043
Tssr144044 17 34590056 to 34590104 48 + TSS region transcription start site region 144044
Tssr144045 17 34590115 to 34590142 27 + TSS region transcription start site region 144045
Tssr144046 17 34590162 to 34590205 43 + TSS region transcription start site region 144046
Tssr144047 17 34590409 to 34590448 39 + TSS region transcription start site region 144047
Tssr144048 17 34590450 to 34590464 14 + TSS region transcription start site region 144048
Tssr144049 17 34590503 to 34590539 36 + TSS region transcription start site region 144049
Tssr144050 17 34590793 to 34590829 36 + TSS region transcription start site region 144050
Tssr144051 17 34590834 to 34590847 13 + TSS region transcription start site region 144051
Tssr144052 17 34590851 to 34590896 45 + TSS region transcription start site region 144052
Cpgi9044 17 34591818 to 34592792 974 CpG island CpG island 9044
Tssr144053 17 34592215 to 34592226 11 + TSS region transcription start site region 144053
Tssr144054 17 34592248 to 34592329 81 + TSS region transcription start site region 144054
Pbx2 17 34592471 to 34597341 4870 + protein coding gene pre B cell leukemia homeobox 2
Tssr144055 17 34592522 to 34592566 44 + TSS region transcription start site region 144055
Tssr144056 17 34593388 to 34593417 29 + TSS region transcription start site region 144056
Cpgi9045 17 34593890 to 34594079 189 CpG island CpG island 9045
Tssr144057 17 34596077 to 34596097 20 + TSS region transcription start site region 144057
Tssr144058 17 34597852 to 34597868 16 + TSS region transcription start site region 144058
Ager 17 34597862 to 34600936 3074 + protein coding gene advanced glycosylation end product-specific receptor
Tssr144059 17 34598152 to 34598164 12 + TSS region transcription start site region 144059
Tssr144060 17 34598443 to 34598450 7 + TSS region transcription start site region 144060
Rnf5 17 34601099 to 34603561 2462 - protein coding gene ring finger protein 5
Gm20463 17 34601151 to 34601576 425 + antisense lncRNA gene predicted gene 20463
Cpgi9046 17 34603253 to 34603646 393 CpG island CpG island 9046
Tssr147602 17 34603399 to 34603410 11 - TSS region transcription start site region 147602
Tssr147603 17 34603477 to 34603488 11 - TSS region transcription start site region 147603
Tssr147604 17 34603522 to 34603626 104 - TSS region transcription start site region 147604
Tssr147605 17 34603675 to 34603702 27 - TSS region transcription start site region 147605
Tssr147606 17 34603709 to 34603724 15 - TSS region transcription start site region 147606
Tssr147607 17 34603738 to 34603749 11 - TSS region transcription start site region 147607
Cpgi9047 17 34603960 to 34604697 737 CpG island CpG island 9047
Tssr144061 17 34604184 to 34604195 11 + TSS region transcription start site region 144061
Tssr144062 17 34604286 to 34604304 18 + TSS region transcription start site region 144062
Agpat1 17 34604303 to 34613449 9146 + protein coding gene 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
Tssr144063 17 34604783 to 34604790 7 + TSS region transcription start site region 144063
Tssr144064 17 34604795 to 34604809 14 + TSS region transcription start site region 144064
Tssr144065 17 34604819 to 34604856 37 + TSS region transcription start site region 144065
Tssr144066 17 34604884 to 34604921 37 + TSS region transcription start site region 144066
Tssr144067 17 34604929 to 34604951 22 + TSS region transcription start site region 144067
Tssr144068 17 34605443 to 34605476 33 + TSS region transcription start site region 144068
Tssr144069 17 34605489 to 34605498 9 + TSS region transcription start site region 144069
Cpgi9048 17 34605518 to 34606447 929 CpG island CpG island 9048
Tssr147608 17 34605717 to 34605731 14 - TSS region transcription start site region 147608
Tssr147609 17 34605747 to 34605765 18 - TSS region transcription start site region 147609
Tssr144070 17 34605855 to 34605862 7 + TSS region transcription start site region 144070
Tssr144071 17 34605864 to 34605881 17 + TSS region transcription start site region 144071
Tssr144072 17 34605899 to 34605939 40 + TSS region transcription start site region 144072
Tssr147610 17 34606345 to 34606359 14 - TSS region transcription start site region 147610
Tssr147611 17 34606649 to 34606662 13 - TSS region transcription start site region 147611
Tssr147612 17 34606907 to 34606923 16 - TSS region transcription start site region 147612
Tssr144073 17 34608979 to 34608980 1 + TSS region transcription start site region 144073
Tssr144074 17 34608986 to 34608989 3 + TSS region transcription start site region 144074
Tssr144075 17 34608997 to 34609021 24 + TSS region transcription start site region 144075
Tssr144076 17 34610009 to 34610019 10 + TSS region transcription start site region 144076
Tssr144077 17 34610933 to 34610948 15 + TSS region transcription start site region 144077
Tssr144078 17 34611807 to 34611820 13 + TSS region transcription start site region 144078
Tssr144079 17 34612594 to 34612630 36 + TSS region transcription start site region 144079
Tssr144080 17 34612688 to 34612704 16 + TSS region transcription start site region 144080
Tssr144081 17 34612729 to 34612762 33 + TSS region transcription start site region 144081
Tssr144082 17 34613222 to 34613226 4 + TSS region transcription start site region 144082
Egfl8 17 34613349 to 34615971 2622 - protein coding gene EGF-like domain 8
Gm20460 17 34614484 to 34627349 12865 - unclassified non-coding RNA gene predicted gene 20460
Tssr147613 17 34615776 to 34615793 17 - TSS region transcription start site region 147613
Tssr147614 17 34615795 to 34615809 14 - TSS region transcription start site region 147614
Tssr147615 17 34615965 to 34615978 13 - TSS region transcription start site region 147615