Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:34271106-34321120

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
H2-Aa 17 34282751 to 34287771 5020 - protein coding gene histocompatibility 2, class II antigen A, alpha
Tssr143987 17 34282752 to 34282766 14 + TSS region transcription start site region 143987
Tssr147559 17 34282887 to 34282896 9 - TSS region transcription start site region 147559
Tssr147560 17 34282915 to 34282926 11 - TSS region transcription start site region 147560
Tssr147561 17 34282970 to 34283010 40 - TSS region transcription start site region 147561
Tssr147562 17 34283011 to 34283031 20 - TSS region transcription start site region 147562
Tssr147563 17 34283176 to 34283188 12 - TSS region transcription start site region 147563
Tssr147564 17 34283306 to 34283315 9 - TSS region transcription start site region 147564
Tssr147565 17 34283670 to 34283723 53 - TSS region transcription start site region 147565
Tssr147566 17 34283766 to 34283785 19 - TSS region transcription start site region 147566
Tssr147567 17 34284434 to 34284521 87 - TSS region transcription start site region 147567
Tssr143988 17 34286191 to 34286199 8 + TSS region transcription start site region 143988
Tssr147568 17 34287110 to 34287153 43 - TSS region transcription start site region 147568
Tssr147569 17 34287770 to 34287830 60 - TSS region transcription start site region 147569
Tssr143989 17 34287971 to 34287983 12 + TSS region transcription start site region 143989
Tssr147570 17 34287992 to 34288021 29 - TSS region transcription start site region 147570
Tssr143990 17 34288019 to 34288025 6 + TSS region transcription start site region 143990
Tssr147571 17 34291677 to 34291716 39 - TSS region transcription start site region 147571
Tssr143991 17 34291818 to 34291828 10 + TSS region transcription start site region 143991
Tssr143992 17 34291854 to 34291855 1 + TSS region transcription start site region 143992
Tssr143993 17 34291867 to 34291872 5 + TSS region transcription start site region 143993
Gm20513 17 34293073 to 34305720 12647 - lincRNA gene predicted gene 20513
Tssr147572 17 34293423 to 34293430 7 - TSS region transcription start site region 147572
Tssr147573 17 34293710 to 34293726 16 - TSS region transcription start site region 147573
Tssr143994 17 34293841 to 34293848 7 + TSS region transcription start site region 143994
Tssr143995 17 34293868 to 34293880 12 + TSS region transcription start site region 143995
Tssr143996 17 34293906 to 34293917 11 + TSS region transcription start site region 143996
Tssr143997 17 34293921 to 34293934 13 + TSS region transcription start site region 143997
Tssr147574 17 34296071 to 34296074 3 - TSS region transcription start site region 147574
Tssr147575 17 34296106 to 34296120 14 - TSS region transcription start site region 147575
Tssr147576 17 34296165 to 34296178 13 - TSS region transcription start site region 147576
Tssr143998 17 34299647 to 34299675 28 + TSS region transcription start site region 143998
Tssr143999 17 34300860 to 34300876 16 + TSS region transcription start site region 143999
Tssr147577 17 34301145 to 34301163 18 - TSS region transcription start site region 147577
Tssr147578 17 34301192 to 34301206 14 - TSS region transcription start site region 147578
Tssr144000 17 34301464 to 34301482 18 + TSS region transcription start site region 144000
Tssr147579 17 34304809 to 34304825 16 - TSS region transcription start site region 147579
Tssr147580 17 34304862 to 34304871 9 - TSS region transcription start site region 147580
Tssr144001 17 34305009 to 34305014 5 + TSS region transcription start site region 144001
Tssr144002 17 34305041 to 34305062 21 + TSS region transcription start site region 144002
Tssr144003 17 34305068 to 34305075 7 + TSS region transcription start site region 144003
Tssr147581 17 34305703 to 34305714 11 - TSS region transcription start site region 147581
Tssr147582 17 34305715 to 34305728 13 - TSS region transcription start site region 147582
H2-Eb1 17 34305877 to 34316199 10322 + protein coding gene histocompatibility 2, class II antigen E beta
Tssr144004 17 34305889 to 34305909 20 + TSS region transcription start site region 144004
Tssr144005 17 34305910 to 34305934 24 + TSS region transcription start site region 144005
Tssr144006 17 34306586 to 34306601 15 + TSS region transcription start site region 144006
Tssr144007 17 34306648 to 34306655 7 + TSS region transcription start site region 144007
Tssr144008 17 34306663 to 34306672 9 + TSS region transcription start site region 144008
Tssr144009 17 34306747 to 34306760 13 + TSS region transcription start site region 144009
Tssr144010 17 34307547 to 34307550 3 + TSS region transcription start site region 144010
Cpgi9039 17 34309453 to 34310028 575 CpG island CpG island 9039
Tssr147583 17 34309817 to 34309831 14 - TSS region transcription start site region 147583
Tssr144011 17 34312067 to 34312072 5 + TSS region transcription start site region 144011
Tssr144012 17 34312112 to 34312116 4 + TSS region transcription start site region 144012
Tssr144013 17 34315086 to 34315097 11 + TSS region transcription start site region 144013
Tssr144014 17 34315902 to 34315925 23 + TSS region transcription start site region 144014
Tssr147584 17 34315906 to 34315921 15 - TSS region transcription start site region 147584