Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:34196106-34396120

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189 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tap1 17 34187556 to 34197225 9669 + protein coding gene transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
Tssr143929 17 34196845 to 34196858 13 + TSS region transcription start site region 143929
Cpgi9033 17 34197385 to 34197888 503 CpG island CpG island 9033
Tssr143930 17 34197715 to 34197728 13 + TSS region transcription start site region 143930
Tssr5093 17 34197733 to 34197761 28 + TSS region transcription start site region 5093
Cpgi9034 17 34198159 to 34198783 624 CpG island CpG island 9034
Tssr143931 17 34198179 to 34198206 27 + TSS region transcription start site region 143931
Psmb8 17 34198195 to 34201454 3259 + protein coding gene proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7)
Tssr143932 17 34198342 to 34198384 42 + TSS region transcription start site region 143932
Tssr143933 17 34198385 to 34198400 15 + TSS region transcription start site region 143933
Tssr143934 17 34198604 to 34198620 16 + TSS region transcription start site region 143934
Gm20496 17 34199316 to 34205449 6133 - antisense lncRNA gene predicted gene 20496
D17Mit1001 17 34199761 to 34199863 102 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 1001
Tssr143935 17 34200707 to 34200729 22 + TSS region transcription start site region 143935
Tssr143936 17 34200861 to 34200872 11 + TSS region transcription start site region 143936
Tssr147541 17 34201437 to 34201453 16 - TSS region transcription start site region 147541
Tssr143937 17 34204092 to 34204110 18 + TSS region transcription start site region 143937
Cpgi9035 17 34204386 to 34205150 764 CpG island CpG island 9035
Tssr143938 17 34204477 to 34204500 23 + TSS region transcription start site region 143938
Tap2 17 34204479 to 34216321 11842 + protein coding gene transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
Tssr143939 17 34204507 to 34204573 66 + TSS region transcription start site region 143939
Tssr143940 17 34204584 to 34204593 9 + TSS region transcription start site region 143940
Tssr143941 17 34204831 to 34204864 33 + TSS region transcription start site region 143941
Tssr143942 17 34205556 to 34205574 18 + TSS region transcription start site region 143942
Tssr143943 17 34208386 to 34208394 8 + TSS region transcription start site region 143943
Tssr143944 17 34208752 to 34208773 21 + TSS region transcription start site region 143944
Tssr143945 17 34208778 to 34208792 14 + TSS region transcription start site region 143945
Gm15821 17 34211312 to 34214459 3147 - protein coding gene predicted gene 15821
Cpgi9036 17 34211834 to 34212060 226 CpG island CpG island 9036
Tssr143946 17 34211940 to 34211945 5 + TSS region transcription start site region 143946
Tssr5094 17 34211962 to 34211969 7 + TSS region transcription start site region 5094
Tssr143947 17 34211972 to 34211994 22 + TSS region transcription start site region 143947
Cpgi9037 17 34214056 to 34214249 193 CpG island CpG island 9037
Tssr147542 17 34214471 to 34214486 15 - TSS region transcription start site region 147542
Tssr143948 17 34214902 to 34214908 6 + TSS region transcription start site region 143948
Tssr143949 17 34238896 to 34238911 15 + TSS region transcription start site region 143949
H2-Ob 17 34238903 to 34245907 7004 + protein coding gene histocompatibility 2, O region beta locus
Tssr143950 17 34238914 to 34238964 50 + TSS region transcription start site region 143950
Tssr147543 17 34239675 to 34239689 14 - TSS region transcription start site region 147543
Tssr147544 17 34239704 to 34239718 14 - TSS region transcription start site region 147544
Tssr147545 17 34239720 to 34239735 15 - TSS region transcription start site region 147545
Tssr143951 17 34239871 to 34239881 10 + TSS region transcription start site region 143951
Tssr143952 17 34240015 to 34240057 42 + TSS region transcription start site region 143952
Sxbq3 17 34243234 to 34243371 137 QTL SGC/Knj cross B6 QTL 3
Leusq6 17 34243234 to 34243371 137 QTL leucocytosis susceptibility QTL 6
Char3 17 34243234 to 34243371 137 QTL P. chabaudi malaria resistance QTL 3
D17Mit21 17 34243234 to 34243371 137 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 21
Leusq3 17 34243234 to 34243371 137 QTL leucocytosis susceptibility QTL 3
Sst6 17 34243234 to 34333707 90473 QTL susceptibility to tuberculosis 6
Gm20506 17 34249057 to 34250264 1207 + lincRNA gene predicted gene 20506
Tssr143953 17 34256710 to 34256722 12 + TSS region transcription start site region 143953
Tssr143954 17 34257877 to 34257888 11 + TSS region transcription start site region 143954
Tssr143955 17 34257934 to 34257965 31 + TSS region transcription start site region 143955
Tssr147546 17 34261588 to 34261593 5 - TSS region transcription start site region 147546
Tssr147547 17 34261613 to 34261627 14 - TSS region transcription start site region 147547
Tssr147548 17 34261630 to 34261644 14 - TSS region transcription start site region 147548
Tssr143956 17 34261801 to 34261829 28 + TSS region transcription start site region 143956
Tssr143957 17 34261847 to 34261851 4 + TSS region transcription start site region 143957
Tssr143958 17 34261853 to 34261858 5 + TSS region transcription start site region 143958
Tssr147549 17 34263047 to 34263056 9 - TSS region transcription start site region 147549
Tssr147550 17 34263091 to 34263111 20 - TSS region transcription start site region 147550
Tssr143959 17 34263224 to 34263256 32 + TSS region transcription start site region 143959
H2-Ab1 17 34263227 to 34269418 6191 + protein coding gene histocompatibility 2, class II antigen A, beta 1
Tssr147551 17 34264128 to 34264147 19 - TSS region transcription start site region 147551
Cpgi9038 17 34264226 to 34265490 1264 CpG island CpG island 9038
Tssr143960 17 34264242 to 34264284 42 + TSS region transcription start site region 143960
Tssr143961 17 34264397 to 34264410 13 + TSS region transcription start site region 143961
Tssr143962 17 34264527 to 34264564 37 + TSS region transcription start site region 143962
Tssr143963 17 34264758 to 34264768 10 + TSS region transcription start site region 143963
Tssr143964 17 34264780 to 34264796 16 + TSS region transcription start site region 143964
Tssr143965 17 34264802 to 34264813 11 + TSS region transcription start site region 143965
Tssr143966 17 34264820 to 34264838 18 + TSS region transcription start site region 143966
Tssr147552 17 34264829 to 34264872 43 - TSS region transcription start site region 147552
D17Dgm2 17 34264832 to 34265032 200 DNA segment DNA segment, Chr 17, Department of Geriatric Medicine 2
Tssr143967 17 34264847 to 34264860 13 + TSS region transcription start site region 143967
Tssr143968 17 34264880 to 34264891 11 + TSS region transcription start site region 143968
Tssr143969 17 34264905 to 34264930 25 + TSS region transcription start site region 143969
Tssr143970 17 34264935 to 34264958 23 + TSS region transcription start site region 143970
Tssr147553 17 34264994 to 34265015 21 - TSS region transcription start site region 147553
Tssr143971 17 34264998 to 34265008 10 + TSS region transcription start site region 143971
Tssr143972 17 34267327 to 34267345 18 + TSS region transcription start site region 143972
Tssr143973 17 34267365 to 34267383 18 + TSS region transcription start site region 143973
Tssr147554 17 34267465 to 34267475 10 - TSS region transcription start site region 147554
Tssr143974 17 34267469 to 34267484 15 + TSS region transcription start site region 143974
Tssr143975 17 34267502 to 34267512 10 + TSS region transcription start site region 143975
Tssr143976 17 34267547 to 34267568 21 + TSS region transcription start site region 143976
Tssr143977 17 34267919 to 34267930 11 + TSS region transcription start site region 143977
Tssr143978 17 34267967 to 34267974 7 + TSS region transcription start site region 143978
Tssr143979 17 34267994 to 34268005 11 + TSS region transcription start site region 143979
Tssr143980 17 34268662 to 34268667 5 + TSS region transcription start site region 143980
Tssr143981 17 34268675 to 34268685 10 + TSS region transcription start site region 143981
Tssr143982 17 34269077 to 34269104 27 + TSS region transcription start site region 143982
Tssr143983 17 34269118 to 34269127 9 + TSS region transcription start site region 143983
Tssr143984 17 34269141 to 34269201 60 + TSS region transcription start site region 143984
Tssr143985 17 34269202 to 34269239 37 + TSS region transcription start site region 143985
Tssr147555 17 34269224 to 34269263 39 - TSS region transcription start site region 147555
Tssr143986 17 34269256 to 34269261 5 + TSS region transcription start site region 143986
Tssr147556 17 34269322 to 34269337 15 - TSS region transcription start site region 147556
Tssr147557 17 34269363 to 34269388 25 - TSS region transcription start site region 147557
Tssr147558 17 34269407 to 34269410 3 - TSS region transcription start site region 147558
H2-Aa 17 34282751 to 34287771 5020 - protein coding gene histocompatibility 2, class II antigen A, alpha
Tssr143987 17 34282752 to 34282766 14 + TSS region transcription start site region 143987
Tssr147559 17 34282887 to 34282896 9 - TSS region transcription start site region 147559
Tssr147560 17 34282915 to 34282926 11 - TSS region transcription start site region 147560
Tssr147561 17 34282970 to 34283010 40 - TSS region transcription start site region 147561
Tssr147562 17 34283011 to 34283031 20 - TSS region transcription start site region 147562
Tssr147563 17 34283176 to 34283188 12 - TSS region transcription start site region 147563
Tssr147564 17 34283306 to 34283315 9 - TSS region transcription start site region 147564
Tssr147565 17 34283670 to 34283723 53 - TSS region transcription start site region 147565
Tssr147566 17 34283766 to 34283785 19 - TSS region transcription start site region 147566
Tssr147567 17 34284434 to 34284521 87 - TSS region transcription start site region 147567
Tssr143988 17 34286191 to 34286199 8 + TSS region transcription start site region 143988
Tssr147568 17 34287110 to 34287153 43 - TSS region transcription start site region 147568
Tssr147569 17 34287770 to 34287830 60 - TSS region transcription start site region 147569
Tssr143989 17 34287971 to 34287983 12 + TSS region transcription start site region 143989
Tssr147570 17 34287992 to 34288021 29 - TSS region transcription start site region 147570
Tssr143990 17 34288019 to 34288025 6 + TSS region transcription start site region 143990
Tssr147571 17 34291677 to 34291716 39 - TSS region transcription start site region 147571
Tssr143991 17 34291818 to 34291828 10 + TSS region transcription start site region 143991
Tssr143992 17 34291854 to 34291855 1 + TSS region transcription start site region 143992
Tssr143993 17 34291867 to 34291872 5 + TSS region transcription start site region 143993
Gm20513 17 34293073 to 34305720 12647 - lincRNA gene predicted gene 20513
Tssr147572 17 34293423 to 34293430 7 - TSS region transcription start site region 147572
Tssr147573 17 34293710 to 34293726 16 - TSS region transcription start site region 147573
Tssr143994 17 34293841 to 34293848 7 + TSS region transcription start site region 143994
Tssr143995 17 34293868 to 34293880 12 + TSS region transcription start site region 143995
Tssr143996 17 34293906 to 34293917 11 + TSS region transcription start site region 143996
Tssr143997 17 34293921 to 34293934 13 + TSS region transcription start site region 143997
Tssr147574 17 34296071 to 34296074 3 - TSS region transcription start site region 147574
Tssr147575 17 34296106 to 34296120 14 - TSS region transcription start site region 147575
Tssr147576 17 34296165 to 34296178 13 - TSS region transcription start site region 147576
Tssr143998 17 34299647 to 34299675 28 + TSS region transcription start site region 143998
Tssr143999 17 34300860 to 34300876 16 + TSS region transcription start site region 143999
Tssr147577 17 34301145 to 34301163 18 - TSS region transcription start site region 147577
Tssr147578 17 34301192 to 34301206 14 - TSS region transcription start site region 147578
Tssr144000 17 34301464 to 34301482 18 + TSS region transcription start site region 144000
Tssr147579 17 34304809 to 34304825 16 - TSS region transcription start site region 147579
Tssr147580 17 34304862 to 34304871 9 - TSS region transcription start site region 147580
Tssr144001 17 34305009 to 34305014 5 + TSS region transcription start site region 144001
Tssr144002 17 34305041 to 34305062 21 + TSS region transcription start site region 144002
Tssr144003 17 34305068 to 34305075 7 + TSS region transcription start site region 144003
Tssr147581 17 34305703 to 34305714 11 - TSS region transcription start site region 147581
Tssr147582 17 34305715 to 34305728 13 - TSS region transcription start site region 147582
H2-Eb1 17 34305877 to 34316199 10322 + protein coding gene histocompatibility 2, class II antigen E beta
Tssr144004 17 34305889 to 34305909 20 + TSS region transcription start site region 144004
Tssr144005 17 34305910 to 34305934 24 + TSS region transcription start site region 144005
Tssr144006 17 34306586 to 34306601 15 + TSS region transcription start site region 144006
Tssr144007 17 34306648 to 34306655 7 + TSS region transcription start site region 144007
Tssr144008 17 34306663 to 34306672 9 + TSS region transcription start site region 144008
Tssr144009 17 34306747 to 34306760 13 + TSS region transcription start site region 144009
Tssr144010 17 34307547 to 34307550 3 + TSS region transcription start site region 144010
Cpgi9039 17 34309453 to 34310028 575 CpG island CpG island 9039
Tssr147583 17 34309817 to 34309831 14 - TSS region transcription start site region 147583
Tssr144011 17 34312067 to 34312072 5 + TSS region transcription start site region 144011
Tssr144012 17 34312112 to 34312116 4 + TSS region transcription start site region 144012
Tssr144013 17 34315086 to 34315097 11 + TSS region transcription start site region 144013
Tssr144014 17 34315902 to 34315925 23 + TSS region transcription start site region 144014
Tssr147584 17 34315906 to 34315921 15 - TSS region transcription start site region 147584
Tssr144015 17 34325635 to 34325642 7 + TSS region transcription start site region 144015
Tssr144016 17 34325658 to 34325679 21 + TSS region transcription start site region 144016
H2-Eb2 17 34325665 to 34340229 14564 + protein coding gene histocompatibility 2, class II antigen E beta2
Tssr144017 17 34330051 to 34330066 15 + TSS region transcription start site region 144017
D17Mit22 17 34333549 to 34333707 158 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 22
Gm11140 17 34340877 to 34341409 532 protein coding gene predicted gene 11140
Tssr144018 17 34341952 to 34341959 7 + TSS region transcription start site region 144018
D17Rua10 17 34341956 to 34342190 234 DNA segment DNA segment, Chr 17, Rutgers University 10
Tssr147585 17 34342125 to 34342141 16 - TSS region transcription start site region 147585
H2-Ea-ps 17 34342933 to 34344643 1710 - pseudogene histocompatibility 2, class II antigen E alpha, pseudogene
Tssr147586 17 34342950 to 34342977 27 - TSS region transcription start site region 147586
Tssr147587 17 34342988 to 34343003 15 - TSS region transcription start site region 147587
Tssr147588 17 34343010 to 34343034 24 - TSS region transcription start site region 147588
Tssr147589 17 34343697 to 34343750 53 - TSS region transcription start site region 147589
D17Rua2 17 34344131 to 34344300 169 DNA segment DNA segment, Chr 17, Rutgers University 2
Tssr147590 17 34344186 to 34344191 5 - TSS region transcription start site region 147590
Tssr147591 17 34344557 to 34344594 37 - TSS region transcription start site region 147591
Tssr147592 17 34347659 to 34347678 19 - TSS region transcription start site region 147592
Tssr144019 17 34347801 to 34347805 4 + TSS region transcription start site region 144019
Tssr144020 17 34354787 to 34354836 49 + TSS region transcription start site region 144020
Btnl2 17 34354822 to 34369493 14671 + protein coding gene butyrophilin-like 2
Tssr144021 17 34354842 to 34354865 23 + TSS region transcription start site region 144021
Tssr144022 17 34355233 to 34355251 18 + TSS region transcription start site region 144022
Tssr144023 17 34372271 to 34372278 7 + TSS region transcription start site region 144023
Tssr144024 17 34377124 to 34377154 30 + TSS region transcription start site region 144024
Btnl1 17 34377132 to 34385776 8644 + protein coding gene butyrophilin-like 1
Tssr144025 17 34377160 to 34377177 17 + TSS region transcription start site region 144025
Gm15320 17 34391361 to 34398162 6801 - pseudogene predicted gene 15320
Cpgi9040 17 34392305 to 34392597 292 CpG island CpG island 9040
Tssr144026 17 34392306 to 34392314 8 + TSS region transcription start site region 144026
Gm15321 17 34392403 to 34392690 287 + pseudogene predicted gene 15321