Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:34195556-34215574

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tap1 17 34187556 to 34197225 9669 + protein coding gene transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
Tssr143929 17 34196845 to 34196858 13 + TSS region transcription start site region 143929
Cpgi9033 17 34197385 to 34197888 503 CpG island CpG island 9033
Tssr143930 17 34197715 to 34197728 13 + TSS region transcription start site region 143930
Tssr5093 17 34197733 to 34197761 28 + TSS region transcription start site region 5093
Cpgi9034 17 34198159 to 34198783 624 CpG island CpG island 9034
Tssr143931 17 34198179 to 34198206 27 + TSS region transcription start site region 143931
Psmb8 17 34198195 to 34201454 3259 + protein coding gene proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7)
Tssr143932 17 34198342 to 34198384 42 + TSS region transcription start site region 143932
Tssr143933 17 34198385 to 34198400 15 + TSS region transcription start site region 143933
Tssr143934 17 34198604 to 34198620 16 + TSS region transcription start site region 143934
Gm20496 17 34199316 to 34205449 6133 - antisense lncRNA gene predicted gene 20496
D17Mit1001 17 34199761 to 34199863 102 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 1001
Tssr143935 17 34200707 to 34200729 22 + TSS region transcription start site region 143935
Tssr143936 17 34200861 to 34200872 11 + TSS region transcription start site region 143936
Tssr147541 17 34201437 to 34201453 16 - TSS region transcription start site region 147541
Tssr143937 17 34204092 to 34204110 18 + TSS region transcription start site region 143937
Cpgi9035 17 34204386 to 34205150 764 CpG island CpG island 9035
Tssr143938 17 34204477 to 34204500 23 + TSS region transcription start site region 143938
Tap2 17 34204479 to 34216321 11842 + protein coding gene transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
Tssr143939 17 34204507 to 34204573 66 + TSS region transcription start site region 143939
Tssr143940 17 34204584 to 34204593 9 + TSS region transcription start site region 143940
Tssr143941 17 34204831 to 34204864 33 + TSS region transcription start site region 143941
Tssr143942 17 34205556 to 34205574 18 + TSS region transcription start site region 143942
Tssr143943 17 34208386 to 34208394 8 + TSS region transcription start site region 143943
Tssr143944 17 34208752 to 34208773 21 + TSS region transcription start site region 143944
Tssr143945 17 34208778 to 34208792 14 + TSS region transcription start site region 143945
Gm15821 17 34211312 to 34214459 3147 - protein coding gene predicted gene 15821
Cpgi9036 17 34211834 to 34212060 226 CpG island CpG island 9036
Tssr143946 17 34211940 to 34211945 5 + TSS region transcription start site region 143946
Tssr5094 17 34211962 to 34211969 7 + TSS region transcription start site region 5094
Tssr143947 17 34211972 to 34211994 22 + TSS region transcription start site region 143947
Cpgi9037 17 34214056 to 34214249 193 CpG island CpG island 9037
Tssr147542 17 34214471 to 34214486 15 - TSS region transcription start site region 147542
Tssr143948 17 34214902 to 34214908 6 + TSS region transcription start site region 143948