Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:34159377-34199509

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
H2-DMb1 17 34153191 to 34160229 7038 + protein coding gene histocompatibility 2, class II, locus Mb1
D17Dgm1 17 34179377 to 34179509 132 DNA segment DNA segment, Chr 17, Department of Geriatric Medicine 1
Psmb9 17 34182030 to 34187330 5300 - protein coding gene proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)
D17Dgm6 17 34182101 to 34182226 125 DNA segment DNA segment, Chr 17, Department of Geriatric Medicine 6
D17Dgm5 17 34184329 to 34184403 74 DNA segment DNA segment, Chr 17, Department of Geriatric Medicine 5
D17Mit103 17 34184468 to 34184614 146 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 103
D17Dgm4 17 34184507 to 34184624 117 DNA segment DNA segment, Chr 17, Department of Geriatric Medicine 4
Tssr147538 17 34186983 to 34187011 28 - TSS region transcription start site region 147538
Cpgi9032 17 34186985 to 34188438 1453 CpG island CpG island 9032
Tssr143920 17 34187021 to 34187028 7 + TSS region transcription start site region 143920
Tssr143921 17 34187041 to 34187052 11 + TSS region transcription start site region 143921
Tssr147539 17 34187328 to 34187345 17 - TSS region transcription start site region 147539
Tssr147540 17 34187351 to 34187380 29 - TSS region transcription start site region 147540
Tssr143922 17 34187545 to 34187571 26 + TSS region transcription start site region 143922
Tap1 17 34187556 to 34197225 9669 + protein coding gene transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
Tssr143923 17 34187600 to 34187608 8 + TSS region transcription start site region 143923
Tssr143924 17 34187690 to 34187699 9 + TSS region transcription start site region 143924
Tssr143925 17 34187702 to 34187749 47 + TSS region transcription start site region 143925
Tssr143926 17 34187789 to 34187828 39 + TSS region transcription start site region 143926
Tssr143927 17 34187831 to 34187867 36 + TSS region transcription start site region 143927
Tssr143928 17 34193310 to 34193324 14 + TSS region transcription start site region 143928
Tssr143929 17 34196845 to 34196858 13 + TSS region transcription start site region 143929
Cpgi9033 17 34197385 to 34197888 503 CpG island CpG island 9033
Tssr143930 17 34197715 to 34197728 13 + TSS region transcription start site region 143930
Tssr5093 17 34197733 to 34197761 28 + TSS region transcription start site region 5093
Cpgi9034 17 34198159 to 34198783 624 CpG island CpG island 9034
Tssr143931 17 34198179 to 34198206 27 + TSS region transcription start site region 143931
Psmb8 17 34198195 to 34201454 3259 + protein coding gene proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7)
Tssr143932 17 34198342 to 34198384 42 + TSS region transcription start site region 143932
Tssr143933 17 34198385 to 34198400 15 + TSS region transcription start site region 143933
Tssr143934 17 34198604 to 34198620 16 + TSS region transcription start site region 143934
Gm20496 17 34199316 to 34205449 6133 - antisense lncRNA gene predicted gene 20496