Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:34122556-34262225

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104 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Brd2 17 34112019 to 34122615 10596 - protein coding gene bromodomain containing 2
Cpgi9030 17 34118069 to 34123049 4980 CpG island CpG island 9030
Tssr147535 17 34122572 to 34122632 60 - TSS region transcription start site region 147535
Tssr147536 17 34122635 to 34122646 11 - TSS region transcription start site region 147536
Tssr143904 17 34122679 to 34122721 42 + TSS region transcription start site region 143904
Tssr143905 17 34122815 to 34122883 68 + TSS region transcription start site region 143905
Tssr147537 17 34129400 to 34129412 12 - TSS region transcription start site region 147537
Gm20493 17 34133325 to 34133537 212 - pseudogene predicted gene 20493
H2-DMa 17 34135182 to 34139101 3919 + protein coding gene histocompatibility 2, class II, locus DMa
Cpgi9031 17 34135361 to 34135854 493 CpG island CpG island 9031
Tssr143906 17 34135581 to 34135671 90 + TSS region transcription start site region 143906
Tssr143907 17 34135684 to 34135729 45 + TSS region transcription start site region 143907
Tssr143908 17 34137294 to 34137311 17 + TSS region transcription start site region 143908
Tssr143909 17 34138002 to 34138024 22 + TSS region transcription start site region 143909
Tssr143910 17 34139399 to 34139403 4 + TSS region transcription start site region 143910
Tssr143911 17 34143222 to 34143255 33 + TSS region transcription start site region 143911
Tssr143912 17 34143341 to 34143375 34 + TSS region transcription start site region 143912
Tssr143913 17 34145199 to 34145215 16 + TSS region transcription start site region 143913
Tssr143914 17 34145225 to 34145230 5 + TSS region transcription start site region 143914
Tssr143915 17 34145231 to 34145265 34 + TSS region transcription start site region 143915
Tssr143916 17 34145311 to 34145331 20 + TSS region transcription start site region 143916
H2-DMb2 17 34145416 to 34151095 5679 + protein coding gene histocompatibility 2, class II, locus Mb2
Tssr143917 17 34153152 to 34153164 12 + TSS region transcription start site region 143917
Tssr143918 17 34153165 to 34153239 74 + TSS region transcription start site region 143918
H2-DMb1 17 34153191 to 34160229 7038 + protein coding gene histocompatibility 2, class II, locus Mb1
Tssr143919 17 34157633 to 34157675 42 + TSS region transcription start site region 143919
D17Dgm1 17 34179377 to 34179509 132 DNA segment DNA segment, Chr 17, Department of Geriatric Medicine 1
Psmb9 17 34182030 to 34187330 5300 - protein coding gene proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)
D17Dgm6 17 34182101 to 34182226 125 DNA segment DNA segment, Chr 17, Department of Geriatric Medicine 6
D17Dgm5 17 34184329 to 34184403 74 DNA segment DNA segment, Chr 17, Department of Geriatric Medicine 5
D17Mit103 17 34184468 to 34184614 146 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 103
D17Dgm4 17 34184507 to 34184624 117 DNA segment DNA segment, Chr 17, Department of Geriatric Medicine 4
Tssr147538 17 34186983 to 34187011 28 - TSS region transcription start site region 147538
Cpgi9032 17 34186985 to 34188438 1453 CpG island CpG island 9032
Tssr143920 17 34187021 to 34187028 7 + TSS region transcription start site region 143920
Tssr143921 17 34187041 to 34187052 11 + TSS region transcription start site region 143921
Tssr147539 17 34187328 to 34187345 17 - TSS region transcription start site region 147539
Tssr147540 17 34187351 to 34187380 29 - TSS region transcription start site region 147540
Tssr143922 17 34187545 to 34187571 26 + TSS region transcription start site region 143922
Tap1 17 34187556 to 34197225 9669 + protein coding gene transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
Tssr143923 17 34187600 to 34187608 8 + TSS region transcription start site region 143923
Tssr143924 17 34187690 to 34187699 9 + TSS region transcription start site region 143924
Tssr143925 17 34187702 to 34187749 47 + TSS region transcription start site region 143925
Tssr143926 17 34187789 to 34187828 39 + TSS region transcription start site region 143926
Tssr143927 17 34187831 to 34187867 36 + TSS region transcription start site region 143927
Tssr143928 17 34193310 to 34193324 14 + TSS region transcription start site region 143928
Tssr143929 17 34196845 to 34196858 13 + TSS region transcription start site region 143929
Cpgi9033 17 34197385 to 34197888 503 CpG island CpG island 9033
Tssr143930 17 34197715 to 34197728 13 + TSS region transcription start site region 143930
Tssr5093 17 34197733 to 34197761 28 + TSS region transcription start site region 5093
Cpgi9034 17 34198159 to 34198783 624 CpG island CpG island 9034
Tssr143931 17 34198179 to 34198206 27 + TSS region transcription start site region 143931
Psmb8 17 34198195 to 34201454 3259 + protein coding gene proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7)
Tssr143932 17 34198342 to 34198384 42 + TSS region transcription start site region 143932
Tssr143933 17 34198385 to 34198400 15 + TSS region transcription start site region 143933
Tssr143934 17 34198604 to 34198620 16 + TSS region transcription start site region 143934
Gm20496 17 34199316 to 34205449 6133 - antisense lncRNA gene predicted gene 20496
D17Mit1001 17 34199761 to 34199863 102 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 1001
Tssr143935 17 34200707 to 34200729 22 + TSS region transcription start site region 143935
Tssr143936 17 34200861 to 34200872 11 + TSS region transcription start site region 143936
Tssr147541 17 34201437 to 34201453 16 - TSS region transcription start site region 147541
Tssr143937 17 34204092 to 34204110 18 + TSS region transcription start site region 143937
Cpgi9035 17 34204386 to 34205150 764 CpG island CpG island 9035
Tssr143938 17 34204477 to 34204500 23 + TSS region transcription start site region 143938
Tap2 17 34204479 to 34216321 11842 + protein coding gene transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
Tssr143939 17 34204507 to 34204573 66 + TSS region transcription start site region 143939
Tssr143940 17 34204584 to 34204593 9 + TSS region transcription start site region 143940
Tssr143941 17 34204831 to 34204864 33 + TSS region transcription start site region 143941
Tssr143942 17 34205556 to 34205574 18 + TSS region transcription start site region 143942
Tssr143943 17 34208386 to 34208394 8 + TSS region transcription start site region 143943
Tssr143944 17 34208752 to 34208773 21 + TSS region transcription start site region 143944
Tssr143945 17 34208778 to 34208792 14 + TSS region transcription start site region 143945
Gm15821 17 34211312 to 34214459 3147 - protein coding gene predicted gene 15821
Cpgi9036 17 34211834 to 34212060 226 CpG island CpG island 9036
Tssr143946 17 34211940 to 34211945 5 + TSS region transcription start site region 143946
Tssr5094 17 34211962 to 34211969 7 + TSS region transcription start site region 5094
Tssr143947 17 34211972 to 34211994 22 + TSS region transcription start site region 143947
Cpgi9037 17 34214056 to 34214249 193 CpG island CpG island 9037
Tssr147542 17 34214471 to 34214486 15 - TSS region transcription start site region 147542
Tssr143948 17 34214902 to 34214908 6 + TSS region transcription start site region 143948
Tssr143949 17 34238896 to 34238911 15 + TSS region transcription start site region 143949
H2-Ob 17 34238903 to 34245907 7004 + protein coding gene histocompatibility 2, O region beta locus
Tssr143950 17 34238914 to 34238964 50 + TSS region transcription start site region 143950
Tssr147543 17 34239675 to 34239689 14 - TSS region transcription start site region 147543
Tssr147544 17 34239704 to 34239718 14 - TSS region transcription start site region 147544
Tssr147545 17 34239720 to 34239735 15 - TSS region transcription start site region 147545
Tssr143951 17 34239871 to 34239881 10 + TSS region transcription start site region 143951
Tssr143952 17 34240015 to 34240057 42 + TSS region transcription start site region 143952
Sxbq3 17 34243234 to 34243371 137 QTL SGC/Knj cross B6 QTL 3
Char3 17 34243234 to 34243371 137 QTL P. chabaudi malaria resistance QTL 3
Sst6 17 34243234 to 34333707 90473 QTL susceptibility to tuberculosis 6
Leusq3 17 34243234 to 34243371 137 QTL leucocytosis susceptibility QTL 3
Leusq6 17 34243234 to 34243371 137 QTL leucocytosis susceptibility QTL 6
D17Mit21 17 34243234 to 34243371 137 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 21
Gm20506 17 34249057 to 34250264 1207 + lincRNA gene predicted gene 20506
Tssr143953 17 34256710 to 34256722 12 + TSS region transcription start site region 143953
Tssr143954 17 34257877 to 34257888 11 + TSS region transcription start site region 143954
Tssr143955 17 34257934 to 34257965 31 + TSS region transcription start site region 143955
Tssr147546 17 34261588 to 34261593 5 - TSS region transcription start site region 147546
Tssr147547 17 34261613 to 34261627 14 - TSS region transcription start site region 147547
Tssr147548 17 34261630 to 34261644 14 - TSS region transcription start site region 147548
Tssr143956 17 34261801 to 34261829 28 + TSS region transcription start site region 143956
Tssr143957 17 34261847 to 34261851 4 + TSS region transcription start site region 143957
Tssr143958 17 34261853 to 34261858 5 + TSS region transcription start site region 143958