Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:34039871-34439881

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287 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Col11a2 17 34039437 to 34066685 27248 + protein coding gene collagen, type XI, alpha 2
Tssr143890 17 34048398 to 34048411 13 + TSS region transcription start site region 143890
Tssr143891 17 34048417 to 34048425 8 + TSS region transcription start site region 143891
Tssr143892 17 34048433 to 34048438 5 + TSS region transcription start site region 143892
Tssr143893 17 34048444 to 34048456 12 + TSS region transcription start site region 143893
Tssr5092 17 34055060 to 34055082 22 + TSS region transcription start site region 5092
H2-Pb 17 34073762 to 34076162 2400 - pseudogene histocompatibility 2, P region beta locus
Cpgi9027 17 34075997 to 34076236 239 CpG island CpG island 9027
BC051537 17 34083843 to 34095309 11466 - antisense lncRNA gene cDNA sequence BC051537
H2-Pa 17 34084672 to 34085823 1151 + pseudogene histocompatibility 2, P region alpha locus
Tssr143894 17 34092355 to 34092366 11 + TSS region transcription start site region 143894
Tssr143895 17 34092376 to 34092421 45 + TSS region transcription start site region 143895
H2-Oa 17 34092379 to 34095234 2855 + protein coding gene histocompatibility 2, O region alpha locus
D17Dgm3 17 34092449 to 34092524 75 DNA segment DNA segment, Chr 17, Department of Geriatric Medicine 3
Tssr143896 17 34092849 to 34092858 9 + TSS region transcription start site region 143896
Tssr143897 17 34092873 to 34092891 18 + TSS region transcription start site region 143897
Tssr143898 17 34092905 to 34092916 11 + TSS region transcription start site region 143898
Cpgi9028 17 34093905 to 34094093 188 CpG island CpG island 9028
Cpgi9029 17 34094359 to 34094532 173 CpG island CpG island 9029
Brd2 17 34112019 to 34122615 10596 - protein coding gene bromodomain containing 2
Tssr147516 17 34115220 to 34115264 44 - TSS region transcription start site region 147516
Tssr147517 17 34115448 to 34115498 50 - TSS region transcription start site region 147517
Tssr147518 17 34115499 to 34115572 73 - TSS region transcription start site region 147518
Tssr147519 17 34115576 to 34115593 17 - TSS region transcription start site region 147519
Tssr147520 17 34116228 to 34116243 15 - TSS region transcription start site region 147520
Tssr147521 17 34116271 to 34116287 16 - TSS region transcription start site region 147521
Tssr147522 17 34116291 to 34116309 18 - TSS region transcription start site region 147522
Tssr147523 17 34116329 to 34116342 13 - TSS region transcription start site region 147523
Tssr147524 17 34117007 to 34117026 19 - TSS region transcription start site region 147524
Cpgi9030 17 34118069 to 34123049 4980 CpG island CpG island 9030
Tssr147525 17 34118476 to 34118522 46 - TSS region transcription start site region 147525
Tssr147526 17 34119317 to 34119340 23 - TSS region transcription start site region 147526
Tssr143899 17 34119539 to 34119542 3 + TSS region transcription start site region 143899
Tssr143900 17 34119549 to 34119594 45 + TSS region transcription start site region 143900
Tssr143901 17 34119883 to 34119933 50 + TSS region transcription start site region 143901
Tssr147527 17 34120311 to 34120334 23 - TSS region transcription start site region 147527
Tssr147528 17 34120378 to 34120422 44 - TSS region transcription start site region 147528
Tssr147529 17 34120969 to 34120991 22 - TSS region transcription start site region 147529
Tssr147530 17 34120993 to 34121039 46 - TSS region transcription start site region 147530
Tssr143902 17 34121390 to 34121405 15 + TSS region transcription start site region 143902
Tssr143903 17 34121411 to 34121433 22 + TSS region transcription start site region 143903
Tssr147531 17 34121944 to 34121972 28 - TSS region transcription start site region 147531
Tssr147532 17 34122206 to 34122241 35 - TSS region transcription start site region 147532
Tssr147533 17 34122259 to 34122282 23 - TSS region transcription start site region 147533
Tssr147534 17 34122311 to 34122375 64 - TSS region transcription start site region 147534
Tssr147535 17 34122572 to 34122632 60 - TSS region transcription start site region 147535
Tssr147536 17 34122635 to 34122646 11 - TSS region transcription start site region 147536
Tssr143904 17 34122679 to 34122721 42 + TSS region transcription start site region 143904
Tssr143905 17 34122815 to 34122883 68 + TSS region transcription start site region 143905
Tssr147537 17 34129400 to 34129412 12 - TSS region transcription start site region 147537
Gm20493 17 34133325 to 34133537 212 - pseudogene predicted gene 20493
H2-DMa 17 34135182 to 34139101 3919 + protein coding gene histocompatibility 2, class II, locus DMa
Cpgi9031 17 34135361 to 34135854 493 CpG island CpG island 9031
Tssr143906 17 34135581 to 34135671 90 + TSS region transcription start site region 143906
Tssr143907 17 34135684 to 34135729 45 + TSS region transcription start site region 143907
Tssr143908 17 34137294 to 34137311 17 + TSS region transcription start site region 143908
Tssr143909 17 34138002 to 34138024 22 + TSS region transcription start site region 143909
Tssr143910 17 34139399 to 34139403 4 + TSS region transcription start site region 143910
Tssr143911 17 34143222 to 34143255 33 + TSS region transcription start site region 143911
Tssr143912 17 34143341 to 34143375 34 + TSS region transcription start site region 143912
Tssr143913 17 34145199 to 34145215 16 + TSS region transcription start site region 143913
Tssr143914 17 34145225 to 34145230 5 + TSS region transcription start site region 143914
Tssr143915 17 34145231 to 34145265 34 + TSS region transcription start site region 143915
Tssr143916 17 34145311 to 34145331 20 + TSS region transcription start site region 143916
H2-DMb2 17 34145416 to 34151095 5679 + protein coding gene histocompatibility 2, class II, locus Mb2
Tssr143917 17 34153152 to 34153164 12 + TSS region transcription start site region 143917
Tssr143918 17 34153165 to 34153239 74 + TSS region transcription start site region 143918
H2-DMb1 17 34153191 to 34160229 7038 + protein coding gene histocompatibility 2, class II, locus Mb1
Tssr143919 17 34157633 to 34157675 42 + TSS region transcription start site region 143919
D17Dgm1 17 34179377 to 34179509 132 DNA segment DNA segment, Chr 17, Department of Geriatric Medicine 1
Psmb9 17 34182030 to 34187330 5300 - protein coding gene proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)
D17Dgm6 17 34182101 to 34182226 125 DNA segment DNA segment, Chr 17, Department of Geriatric Medicine 6
D17Dgm5 17 34184329 to 34184403 74 DNA segment DNA segment, Chr 17, Department of Geriatric Medicine 5
D17Mit103 17 34184468 to 34184614 146 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 103
D17Dgm4 17 34184507 to 34184624 117 DNA segment DNA segment, Chr 17, Department of Geriatric Medicine 4
Tssr147538 17 34186983 to 34187011 28 - TSS region transcription start site region 147538
Cpgi9032 17 34186985 to 34188438 1453 CpG island CpG island 9032
Tssr143920 17 34187021 to 34187028 7 + TSS region transcription start site region 143920
Tssr143921 17 34187041 to 34187052 11 + TSS region transcription start site region 143921
Tssr147539 17 34187328 to 34187345 17 - TSS region transcription start site region 147539
Tssr147540 17 34187351 to 34187380 29 - TSS region transcription start site region 147540
Tssr143922 17 34187545 to 34187571 26 + TSS region transcription start site region 143922
Tap1 17 34187556 to 34197225 9669 + protein coding gene transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
Tssr143923 17 34187600 to 34187608 8 + TSS region transcription start site region 143923
Tssr143924 17 34187690 to 34187699 9 + TSS region transcription start site region 143924
Tssr143925 17 34187702 to 34187749 47 + TSS region transcription start site region 143925
Tssr143926 17 34187789 to 34187828 39 + TSS region transcription start site region 143926
Tssr143927 17 34187831 to 34187867 36 + TSS region transcription start site region 143927
Tssr143928 17 34193310 to 34193324 14 + TSS region transcription start site region 143928
Tssr143929 17 34196845 to 34196858 13 + TSS region transcription start site region 143929
Cpgi9033 17 34197385 to 34197888 503 CpG island CpG island 9033
Tssr143930 17 34197715 to 34197728 13 + TSS region transcription start site region 143930
Tssr5093 17 34197733 to 34197761 28 + TSS region transcription start site region 5093
Cpgi9034 17 34198159 to 34198783 624 CpG island CpG island 9034
Tssr143931 17 34198179 to 34198206 27 + TSS region transcription start site region 143931
Psmb8 17 34198195 to 34201454 3259 + protein coding gene proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7)
Tssr143932 17 34198342 to 34198384 42 + TSS region transcription start site region 143932
Tssr143933 17 34198385 to 34198400 15 + TSS region transcription start site region 143933
Tssr143934 17 34198604 to 34198620 16 + TSS region transcription start site region 143934
Gm20496 17 34199316 to 34205449 6133 - antisense lncRNA gene predicted gene 20496
D17Mit1001 17 34199761 to 34199863 102 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 1001
Tssr143935 17 34200707 to 34200729 22 + TSS region transcription start site region 143935
Tssr143936 17 34200861 to 34200872 11 + TSS region transcription start site region 143936
Tssr147541 17 34201437 to 34201453 16 - TSS region transcription start site region 147541
Tssr143937 17 34204092 to 34204110 18 + TSS region transcription start site region 143937
Cpgi9035 17 34204386 to 34205150 764 CpG island CpG island 9035
Tssr143938 17 34204477 to 34204500 23 + TSS region transcription start site region 143938
Tap2 17 34204479 to 34216321 11842 + protein coding gene transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
Tssr143939 17 34204507 to 34204573 66 + TSS region transcription start site region 143939
Tssr143940 17 34204584 to 34204593 9 + TSS region transcription start site region 143940
Tssr143941 17 34204831 to 34204864 33 + TSS region transcription start site region 143941
Tssr143942 17 34205556 to 34205574 18 + TSS region transcription start site region 143942
Tssr143943 17 34208386 to 34208394 8 + TSS region transcription start site region 143943
Tssr143944 17 34208752 to 34208773 21 + TSS region transcription start site region 143944
Tssr143945 17 34208778 to 34208792 14 + TSS region transcription start site region 143945
Gm15821 17 34211312 to 34214459 3147 - protein coding gene predicted gene 15821
Cpgi9036 17 34211834 to 34212060 226 CpG island CpG island 9036
Tssr143946 17 34211940 to 34211945 5 + TSS region transcription start site region 143946
Tssr5094 17 34211962 to 34211969 7 + TSS region transcription start site region 5094
Tssr143947 17 34211972 to 34211994 22 + TSS region transcription start site region 143947
Cpgi9037 17 34214056 to 34214249 193 CpG island CpG island 9037
Tssr147542 17 34214471 to 34214486 15 - TSS region transcription start site region 147542
Tssr143948 17 34214902 to 34214908 6 + TSS region transcription start site region 143948
Tssr143949 17 34238896 to 34238911 15 + TSS region transcription start site region 143949
H2-Ob 17 34238903 to 34245907 7004 + protein coding gene histocompatibility 2, O region beta locus
Tssr143950 17 34238914 to 34238964 50 + TSS region transcription start site region 143950
Tssr147543 17 34239675 to 34239689 14 - TSS region transcription start site region 147543
Tssr147544 17 34239704 to 34239718 14 - TSS region transcription start site region 147544
Tssr147545 17 34239720 to 34239735 15 - TSS region transcription start site region 147545
Tssr143951 17 34239871 to 34239881 10 + TSS region transcription start site region 143951
Tssr143952 17 34240015 to 34240057 42 + TSS region transcription start site region 143952
Sxbq3 17 34243234 to 34243371 137 QTL SGC/Knj cross B6 QTL 3
Leusq3 17 34243234 to 34243371 137 QTL leucocytosis susceptibility QTL 3
D17Mit21 17 34243234 to 34243371 137 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 21
Char3 17 34243234 to 34243371 137 QTL P. chabaudi malaria resistance QTL 3
Leusq6 17 34243234 to 34243371 137 QTL leucocytosis susceptibility QTL 6
Sst6 17 34243234 to 34333707 90473 QTL susceptibility to tuberculosis 6
Gm20506 17 34249057 to 34250264 1207 + lincRNA gene predicted gene 20506
Tssr143953 17 34256710 to 34256722 12 + TSS region transcription start site region 143953
Tssr143954 17 34257877 to 34257888 11 + TSS region transcription start site region 143954
Tssr143955 17 34257934 to 34257965 31 + TSS region transcription start site region 143955
Tssr147546 17 34261588 to 34261593 5 - TSS region transcription start site region 147546
Tssr147547 17 34261613 to 34261627 14 - TSS region transcription start site region 147547
Tssr147548 17 34261630 to 34261644 14 - TSS region transcription start site region 147548
Tssr143956 17 34261801 to 34261829 28 + TSS region transcription start site region 143956
Tssr143957 17 34261847 to 34261851 4 + TSS region transcription start site region 143957
Tssr143958 17 34261853 to 34261858 5 + TSS region transcription start site region 143958
Tssr147549 17 34263047 to 34263056 9 - TSS region transcription start site region 147549
Tssr147550 17 34263091 to 34263111 20 - TSS region transcription start site region 147550
Tssr143959 17 34263224 to 34263256 32 + TSS region transcription start site region 143959
H2-Ab1 17 34263227 to 34269418 6191 + protein coding gene histocompatibility 2, class II antigen A, beta 1
Tssr147551 17 34264128 to 34264147 19 - TSS region transcription start site region 147551
Cpgi9038 17 34264226 to 34265490 1264 CpG island CpG island 9038
Tssr143960 17 34264242 to 34264284 42 + TSS region transcription start site region 143960
Tssr143961 17 34264397 to 34264410 13 + TSS region transcription start site region 143961
Tssr143962 17 34264527 to 34264564 37 + TSS region transcription start site region 143962
Tssr143963 17 34264758 to 34264768 10 + TSS region transcription start site region 143963
Tssr143964 17 34264780 to 34264796 16 + TSS region transcription start site region 143964
Tssr143965 17 34264802 to 34264813 11 + TSS region transcription start site region 143965
Tssr143966 17 34264820 to 34264838 18 + TSS region transcription start site region 143966
Tssr147552 17 34264829 to 34264872 43 - TSS region transcription start site region 147552
D17Dgm2 17 34264832 to 34265032 200 DNA segment DNA segment, Chr 17, Department of Geriatric Medicine 2
Tssr143967 17 34264847 to 34264860 13 + TSS region transcription start site region 143967
Tssr143968 17 34264880 to 34264891 11 + TSS region transcription start site region 143968
Tssr143969 17 34264905 to 34264930 25 + TSS region transcription start site region 143969
Tssr143970 17 34264935 to 34264958 23 + TSS region transcription start site region 143970
Tssr147553 17 34264994 to 34265015 21 - TSS region transcription start site region 147553
Tssr143971 17 34264998 to 34265008 10 + TSS region transcription start site region 143971
Tssr143972 17 34267327 to 34267345 18 + TSS region transcription start site region 143972
Tssr143973 17 34267365 to 34267383 18 + TSS region transcription start site region 143973
Tssr147554 17 34267465 to 34267475 10 - TSS region transcription start site region 147554
Tssr143974 17 34267469 to 34267484 15 + TSS region transcription start site region 143974
Tssr143975 17 34267502 to 34267512 10 + TSS region transcription start site region 143975
Tssr143976 17 34267547 to 34267568 21 + TSS region transcription start site region 143976
Tssr143977 17 34267919 to 34267930 11 + TSS region transcription start site region 143977
Tssr143978 17 34267967 to 34267974 7 + TSS region transcription start site region 143978
Tssr143979 17 34267994 to 34268005 11 + TSS region transcription start site region 143979
Tssr143980 17 34268662 to 34268667 5 + TSS region transcription start site region 143980
Tssr143981 17 34268675 to 34268685 10 + TSS region transcription start site region 143981
Tssr143982 17 34269077 to 34269104 27 + TSS region transcription start site region 143982
Tssr143983 17 34269118 to 34269127 9 + TSS region transcription start site region 143983
Tssr143984 17 34269141 to 34269201 60 + TSS region transcription start site region 143984
Tssr143985 17 34269202 to 34269239 37 + TSS region transcription start site region 143985
Tssr147555 17 34269224 to 34269263 39 - TSS region transcription start site region 147555
Tssr143986 17 34269256 to 34269261 5 + TSS region transcription start site region 143986
Tssr147556 17 34269322 to 34269337 15 - TSS region transcription start site region 147556
Tssr147557 17 34269363 to 34269388 25 - TSS region transcription start site region 147557
Tssr147558 17 34269407 to 34269410 3 - TSS region transcription start site region 147558
H2-Aa 17 34282751 to 34287771 5020 - protein coding gene histocompatibility 2, class II antigen A, alpha
Tssr143987 17 34282752 to 34282766 14 + TSS region transcription start site region 143987
Tssr147559 17 34282887 to 34282896 9 - TSS region transcription start site region 147559
Tssr147560 17 34282915 to 34282926 11 - TSS region transcription start site region 147560
Tssr147561 17 34282970 to 34283010 40 - TSS region transcription start site region 147561
Tssr147562 17 34283011 to 34283031 20 - TSS region transcription start site region 147562
Tssr147563 17 34283176 to 34283188 12 - TSS region transcription start site region 147563
Tssr147564 17 34283306 to 34283315 9 - TSS region transcription start site region 147564
Tssr147565 17 34283670 to 34283723 53 - TSS region transcription start site region 147565
Tssr147566 17 34283766 to 34283785 19 - TSS region transcription start site region 147566
Tssr147567 17 34284434 to 34284521 87 - TSS region transcription start site region 147567
Tssr143988 17 34286191 to 34286199 8 + TSS region transcription start site region 143988