Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:34035997-34116236

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rxrb 17 34031812 to 34038393 6581 + protein coding gene retinoid X receptor beta
Cpgi9025 17 34038544 to 34039117 573 CpG island CpG island 9025
Tssr143886 17 34039141 to 34039153 12 + TSS region transcription start site region 143886
Tssr143887 17 34039166 to 34039182 16 + TSS region transcription start site region 143887
Tssr143888 17 34039228 to 34039255 27 + TSS region transcription start site region 143888
Tssr5090 17 34039297 to 34039306 9 + TSS region transcription start site region 5090
Tssr5091 17 34039334 to 34039344 10 + TSS region transcription start site region 5091
Col11a2 17 34039437 to 34066685 27248 + protein coding gene collagen, type XI, alpha 2
Tssr143889 17 34039462 to 34039481 19 + TSS region transcription start site region 143889
Cpgi9026 17 34039474 to 34039674 200 CpG island CpG island 9026
Tssr143890 17 34048398 to 34048411 13 + TSS region transcription start site region 143890
Tssr143891 17 34048417 to 34048425 8 + TSS region transcription start site region 143891
Tssr143892 17 34048433 to 34048438 5 + TSS region transcription start site region 143892
Tssr143893 17 34048444 to 34048456 12 + TSS region transcription start site region 143893
Tssr5092 17 34055060 to 34055082 22 + TSS region transcription start site region 5092
H2-Pb 17 34073762 to 34076162 2400 - pseudogene histocompatibility 2, P region beta locus
Cpgi9027 17 34075997 to 34076236 239 CpG island CpG island 9027
BC051537 17 34083843 to 34095309 11466 - antisense lncRNA gene cDNA sequence BC051537
H2-Pa 17 34084672 to 34085823 1151 + pseudogene histocompatibility 2, P region alpha locus
Tssr143894 17 34092355 to 34092366 11 + TSS region transcription start site region 143894
Tssr143895 17 34092376 to 34092421 45 + TSS region transcription start site region 143895
H2-Oa 17 34092379 to 34095234 2855 + protein coding gene histocompatibility 2, O region alpha locus
D17Dgm3 17 34092449 to 34092524 75 DNA segment DNA segment, Chr 17, Department of Geriatric Medicine 3
Tssr143896 17 34092849 to 34092858 9 + TSS region transcription start site region 143896
Tssr143897 17 34092873 to 34092891 18 + TSS region transcription start site region 143897
Tssr143898 17 34092905 to 34092916 11 + TSS region transcription start site region 143898
Cpgi9028 17 34093905 to 34094093 188 CpG island CpG island 9028
Cpgi9029 17 34094359 to 34094532 173 CpG island CpG island 9029
Brd2 17 34112019 to 34122615 10596 - protein coding gene bromodomain containing 2
Tssr147516 17 34115220 to 34115264 44 - TSS region transcription start site region 147516
Tssr147517 17 34115448 to 34115498 50 - TSS region transcription start site region 147517
Tssr147518 17 34115499 to 34115572 73 - TSS region transcription start site region 147518
Tssr147519 17 34115576 to 34115593 17 - TSS region transcription start site region 147519
Tssr147520 17 34116228 to 34116243 15 - TSS region transcription start site region 147520