Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:33866176-33969325

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119 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smim40-ps 17 33873837 to 33874082 245 + pseudogene small integral membrane protein 40, pseudogene
Kifc1 17 33875664 to 33890633 14969 - protein coding gene kinesin family member C1
Gm27740 17 33886676 to 33886733 57 - miRNA gene predicted gene, 27740
Cpgi9009 17 33890052 to 33891100 1048 CpG island CpG island 9009
Tssr147462 17 33890544 to 33890560 16 - TSS region transcription start site region 147462
Tssr147463 17 33890584 to 33890652 68 - TSS region transcription start site region 147463
Tssr143805 17 33893192 to 33893220 28 + TSS region transcription start site region 143805
Tssr147464 17 33904050 to 33904067 17 - TSS region transcription start site region 147464
Tssr143806 17 33905102 to 33905116 14 + TSS region transcription start site region 143806
Smim40 17 33905135 to 33906675 1540 + lincRNA gene small integral membrane protein 40
BC051226 17 33908182 to 33909178 996 - antisense lncRNA gene cDNA sequence BC051226
Tssr143807 17 33908392 to 33908410 18 + TSS region transcription start site region 143807
Cpgi9010 17 33908448 to 33910109 1661 CpG island CpG island 9010
Tssr147465 17 33909143 to 33909157 14 - TSS region transcription start site region 147465
Tssr147466 17 33909164 to 33909187 23 - TSS region transcription start site region 147466
Tssr147467 17 33909195 to 33909246 51 - TSS region transcription start site region 147467
Tssr147468 17 33909289 to 33909326 37 - TSS region transcription start site region 147468
Tssr143808 17 33909409 to 33909429 20 + TSS region transcription start site region 143808
Daxx 17 33909414 to 33915590 6176 + protein coding gene Fas death domain-associated protein
Tssr143809 17 33909481 to 33909576 95 + TSS region transcription start site region 143809
Tssr143810 17 33909577 to 33909600 23 + TSS region transcription start site region 143810
Tssr143811 17 33909603 to 33909612 9 + TSS region transcription start site region 143811
Tssr143812 17 33909622 to 33909643 21 + TSS region transcription start site region 143812
Tssr147469 17 33910120 to 33910147 27 - TSS region transcription start site region 147469
Tssr143813 17 33910246 to 33910261 15 + TSS region transcription start site region 143813
Tssr143814 17 33910317 to 33910335 18 + TSS region transcription start site region 143814
Tssr143815 17 33910391 to 33910418 27 + TSS region transcription start site region 143815
Tssr143816 17 33910423 to 33910445 22 + TSS region transcription start site region 143816
Tssr143817 17 33911491 to 33911536 45 + TSS region transcription start site region 143817
Tssr143818 17 33911984 to 33911999 15 + TSS region transcription start site region 143818
Tssr143819 17 33912722 to 33912726 4 + TSS region transcription start site region 143819
Cpgi9011 17 33915868 to 33916430 562 CpG island CpG island 9011
Tssr143820 17 33915905 to 33915916 11 + TSS region transcription start site region 143820
Zbtb22 17 33916176 to 33919325 3149 + protein coding gene zinc finger and BTB domain containing 22
Tssr143821 17 33916182 to 33916196 14 + TSS region transcription start site region 143821
Cpgi9012 17 33917058 to 33917253 195 CpG island CpG island 9012
Cpgi9013 17 33918340 to 33918938 598 CpG island CpG island 9013
Tssr143822 17 33919056 to 33919063 7 + TSS region transcription start site region 143822
Gm19412 17 33919279 to 33920485 1206 - antisense lncRNA gene predicted gene, 19412
Cpgi9014 17 33919375 to 33920606 1231 CpG island CpG island 9014
Tssr143823 17 33919470 to 33919477 7 + TSS region transcription start site region 143823
Tapbp 17 33919478 to 33929290 9812 + protein coding gene TAP binding protein
Tssr143824 17 33919486 to 33919498 12 + TSS region transcription start site region 143824
Tssr143825 17 33919563 to 33919579 16 + TSS region transcription start site region 143825
Tssr143826 17 33919597 to 33919617 20 + TSS region transcription start site region 143826
Tssr143827 17 33919619 to 33919628 9 + TSS region transcription start site region 143827
Tssr143828 17 33919645 to 33919676 31 + TSS region transcription start site region 143828
Tssr143829 17 33919679 to 33919690 11 + TSS region transcription start site region 143829
Tssr143830 17 33919725 to 33919736 11 + TSS region transcription start site region 143830
Tssr143831 17 33919827 to 33919833 6 + TSS region transcription start site region 143831
Tssr143832 17 33919862 to 33919877 15 + TSS region transcription start site region 143832
Tssr143833 17 33920242 to 33920337 95 + TSS region transcription start site region 143833
Tssr147470 17 33920343 to 33920372 29 - TSS region transcription start site region 147470
Tssr143834 17 33920398 to 33920414 16 + TSS region transcription start site region 143834
Tssr147471 17 33920470 to 33920500 30 - TSS region transcription start site region 147471
Tssr143835 17 33920490 to 33920514 24 + TSS region transcription start site region 143835
Tssr143836 17 33920522 to 33920554 32 + TSS region transcription start site region 143836
Tssr143837 17 33922804 to 33922852 48 + TSS region transcription start site region 143837
Tssr143838 17 33925400 to 33925445 45 + TSS region transcription start site region 143838
Tssr143839 17 33925469 to 33925491 22 + TSS region transcription start site region 143839
Tssr143840 17 33925695 to 33925710 15 + TSS region transcription start site region 143840
Tssr143841 17 33925732 to 33925764 32 + TSS region transcription start site region 143841
Tssr143842 17 33925992 to 33926029 37 + TSS region transcription start site region 143842
Tssr143843 17 33926165 to 33926191 26 + TSS region transcription start site region 143843
Tssr143844 17 33926265 to 33926279 14 + TSS region transcription start site region 143844
Tssr143845 17 33926312 to 33926326 14 + TSS region transcription start site region 143845
Tssr143846 17 33926411 to 33926414 3 + TSS region transcription start site region 143846
Tssr143847 17 33926417 to 33926429 12 + TSS region transcription start site region 143847
Tssr143848 17 33926449 to 33926467 18 + TSS region transcription start site region 143848
Tssr143849 17 33926619 to 33926637 18 + TSS region transcription start site region 143849
Tssr143850 17 33926657 to 33926676 19 + TSS region transcription start site region 143850
Tssr143851 17 33928155 to 33928250 95 + TSS region transcription start site region 143851
Tssr147472 17 33928200 to 33928236 36 - TSS region transcription start site region 147472
Tssr143852 17 33928270 to 33928301 31 + TSS region transcription start site region 143852
Tssr143853 17 33928475 to 33928477 2 + TSS region transcription start site region 143853
Cpgi9015 17 33928875 to 33930716 1841 CpG island CpG island 9015
Tssr147473 17 33929288 to 33929293 5 - TSS region transcription start site region 147473
Tssr143854 17 33929514 to 33929586 72 + TSS region transcription start site region 143854
Rgl2 17 33929543 to 33937687 8144 + protein coding gene ral guanine nucleotide dissociation stimulator-like 2
Tssr143855 17 33929894 to 33929917 23 + TSS region transcription start site region 143855
Tssr143856 17 33929960 to 33929998 38 + TSS region transcription start site region 143856
Tssr147474 17 33930733 to 33930757 24 - TSS region transcription start site region 147474
Tssr143857 17 33930846 to 33930930 84 + TSS region transcription start site region 143857
Tssr147475 17 33931071 to 33931096 25 - TSS region transcription start site region 147475
Tssr143858 17 33931161 to 33931201 40 + TSS region transcription start site region 143858
Tssr143859 17 33931359 to 33931373 14 + TSS region transcription start site region 143859
Tssr143860 17 33935199 to 33935213 14 + TSS region transcription start site region 143860
Tssr143861 17 33936614 to 33936618 4 + TSS region transcription start site region 143861
Pfdn6 17 33938909 to 33940343 1434 - protein coding gene prefoldin subunit 6
Gm50037 17 33939069 to 33939424 355 + antisense lncRNA gene predicted gene, 50037
Cpgi9016 17 33939753 to 33941539 1786 CpG island CpG island 9016
Tssr147476 17 33940289 to 33940296 7 - TSS region transcription start site region 147476
Tssr147477 17 33940299 to 33940342 43 - TSS region transcription start site region 147477
Wdr46 17 33940660 to 33949697 9037 + protein coding gene WD repeat domain 46
Tssr143862 17 33940661 to 33940709 48 + TSS region transcription start site region 143862
Tssr143863 17 33940715 to 33940729 14 + TSS region transcription start site region 143863
Tssr143864 17 33941238 to 33941280 42 + TSS region transcription start site region 143864
Tssr143865 17 33947980 to 33948008 28 + TSS region transcription start site region 143865
Tssr143866 17 33949254 to 33949296 42 + TSS region transcription start site region 143866
Tssr143867 17 33949412 to 33949424 12 + TSS region transcription start site region 143867
Tssr143868 17 33949486 to 33949535 49 + TSS region transcription start site region 143868
B3galt4 17 33949912 to 33951488 1576 - protein coding gene UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4
Cpgi9017 17 33950911 to 33951704 793 CpG island CpG island 9017
Tssr147478 17 33951046 to 33951064 18 - TSS region transcription start site region 147478
Tssr147479 17 33951079 to 33951123 44 - TSS region transcription start site region 147479
Tssr147480 17 33951438 to 33951493 55 - TSS region transcription start site region 147480
Tssr143869 17 33951520 to 33951527 7 + TSS region transcription start site region 143869
Tssr147481 17 33951716 to 33951728 12 - TSS region transcription start site region 147481
Tssr147482 17 33951772 to 33951786 14 - TSS region transcription start site region 147482
Tssr147483 17 33951791 to 33951803 12 - TSS region transcription start site region 147483
Rps18 17 33951999 to 33955641 3642 - protein coding gene ribosomal protein S18
Cpgi9018 17 33955175 to 33956373 1198 CpG island CpG island 9018
Tssr147484 17 33955658 to 33955686 28 - TSS region transcription start site region 147484
Vps52 17 33955785 to 33966495 10710 + protein coding gene VPS52 GARP complex subunit
Tssr143870 17 33955808 to 33955819 11 + TSS region transcription start site region 143870
Tssr143871 17 33955823 to 33955901 78 + TSS region transcription start site region 143871
Tssr143872 17 33955902 to 33955926 24 + TSS region transcription start site region 143872
Tssr143873 17 33956067 to 33956108 41 + TSS region transcription start site region 143873
Gm23111 17 33959663 to 33959767 104 + snRNA gene predicted gene, 23111