Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:33863192-33923220

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm4134 17 33861302 to 33864228 2926 - pseudogene predicted gene 4134
Smim40-ps 17 33873837 to 33874082 245 + pseudogene small integral membrane protein 40, pseudogene
Kifc1 17 33875664 to 33890633 14969 - protein coding gene kinesin family member C1
Gm27740 17 33886676 to 33886733 57 - miRNA gene predicted gene, 27740
Cpgi9009 17 33890052 to 33891100 1048 CpG island CpG island 9009
Tssr147462 17 33890544 to 33890560 16 - TSS region transcription start site region 147462
Tssr147463 17 33890584 to 33890652 68 - TSS region transcription start site region 147463
Tssr143805 17 33893192 to 33893220 28 + TSS region transcription start site region 143805
Tssr147464 17 33904050 to 33904067 17 - TSS region transcription start site region 147464
Tssr143806 17 33905102 to 33905116 14 + TSS region transcription start site region 143806
Smim40 17 33905135 to 33906675 1540 + lincRNA gene small integral membrane protein 40
BC051226 17 33908182 to 33909178 996 - antisense lncRNA gene cDNA sequence BC051226
Tssr143807 17 33908392 to 33908410 18 + TSS region transcription start site region 143807
Cpgi9010 17 33908448 to 33910109 1661 CpG island CpG island 9010
Tssr147465 17 33909143 to 33909157 14 - TSS region transcription start site region 147465
Tssr147466 17 33909164 to 33909187 23 - TSS region transcription start site region 147466
Tssr147467 17 33909195 to 33909246 51 - TSS region transcription start site region 147467
Tssr147468 17 33909289 to 33909326 37 - TSS region transcription start site region 147468
Tssr143808 17 33909409 to 33909429 20 + TSS region transcription start site region 143808
Daxx 17 33909414 to 33915590 6176 + protein coding gene Fas death domain-associated protein
Tssr143809 17 33909481 to 33909576 95 + TSS region transcription start site region 143809
Tssr143810 17 33909577 to 33909600 23 + TSS region transcription start site region 143810
Tssr143811 17 33909603 to 33909612 9 + TSS region transcription start site region 143811
Tssr143812 17 33909622 to 33909643 21 + TSS region transcription start site region 143812
Tssr147469 17 33910120 to 33910147 27 - TSS region transcription start site region 147469
Tssr143813 17 33910246 to 33910261 15 + TSS region transcription start site region 143813
Tssr143814 17 33910317 to 33910335 18 + TSS region transcription start site region 143814
Tssr143815 17 33910391 to 33910418 27 + TSS region transcription start site region 143815
Tssr143816 17 33910423 to 33910445 22 + TSS region transcription start site region 143816
Tssr143817 17 33911491 to 33911536 45 + TSS region transcription start site region 143817
Tssr143818 17 33911984 to 33911999 15 + TSS region transcription start site region 143818
Tssr143819 17 33912722 to 33912726 4 + TSS region transcription start site region 143819
Cpgi9011 17 33915868 to 33916430 562 CpG island CpG island 9011
Tssr143820 17 33915905 to 33915916 11 + TSS region transcription start site region 143820
Zbtb22 17 33916176 to 33919325 3149 + protein coding gene zinc finger and BTB domain containing 22
Tssr143821 17 33916182 to 33916196 14 + TSS region transcription start site region 143821
Cpgi9012 17 33917058 to 33917253 195 CpG island CpG island 9012
Cpgi9013 17 33918340 to 33918938 598 CpG island CpG island 9013
Tssr143822 17 33919056 to 33919063 7 + TSS region transcription start site region 143822
Gm19412 17 33919279 to 33920485 1206 - antisense lncRNA gene predicted gene, 19412
Cpgi9014 17 33919375 to 33920606 1231 CpG island CpG island 9014
Tssr143823 17 33919470 to 33919477 7 + TSS region transcription start site region 143823
Tapbp 17 33919478 to 33929290 9812 + protein coding gene TAP binding protein
Tssr143824 17 33919486 to 33919498 12 + TSS region transcription start site region 143824
Tssr143825 17 33919563 to 33919579 16 + TSS region transcription start site region 143825
Tssr143826 17 33919597 to 33919617 20 + TSS region transcription start site region 143826
Tssr143827 17 33919619 to 33919628 9 + TSS region transcription start site region 143827
Tssr143828 17 33919645 to 33919676 31 + TSS region transcription start site region 143828
Tssr143829 17 33919679 to 33919690 11 + TSS region transcription start site region 143829
Tssr143830 17 33919725 to 33919736 11 + TSS region transcription start site region 143830
Tssr143831 17 33919827 to 33919833 6 + TSS region transcription start site region 143831
Tssr143832 17 33919862 to 33919877 15 + TSS region transcription start site region 143832
Tssr143833 17 33920242 to 33920337 95 + TSS region transcription start site region 143833
Tssr147470 17 33920343 to 33920372 29 - TSS region transcription start site region 147470
Tssr143834 17 33920398 to 33920414 16 + TSS region transcription start site region 143834
Tssr147471 17 33920470 to 33920500 30 - TSS region transcription start site region 147471
Tssr143835 17 33920490 to 33920514 24 + TSS region transcription start site region 143835
Tssr143836 17 33920522 to 33920554 32 + TSS region transcription start site region 143836
Tssr143837 17 33922804 to 33922852 48 + TSS region transcription start site region 143837