Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:33640616-33920656

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120 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm20507 17 33630759 to 33645705 14946 + unclassified non-coding RNA gene predicted gene 20507
Pram1 17 33638056 to 33645706 7650 + protein coding gene PML-RAR alpha-regulated adaptor molecule 1
Tssr143790 17 33641199 to 33641202 3 + TSS region transcription start site region 143790
Hnrnpm 17 33646233 to 33685458 39225 - protein coding gene heterogeneous nuclear ribonucleoprotein M
Tssr147441 17 33649716 to 33649735 19 - TSS region transcription start site region 147441
Tssr147442 17 33660267 to 33660294 27 - TSS region transcription start site region 147442
Tssr147443 17 33663248 to 33663289 41 - TSS region transcription start site region 147443
Tssr147444 17 33665533 to 33665554 21 - TSS region transcription start site region 147444
Tssr143791 17 33677370 to 33677410 40 + TSS region transcription start site region 143791
Tssr147445 17 33677437 to 33677442 5 - TSS region transcription start site region 147445
Cpgi9001 17 33684654 to 33685804 1150 CpG island CpG island 9001
Tssr147446 17 33685386 to 33685410 24 - TSS region transcription start site region 147446
Tssr147447 17 33685412 to 33685423 11 - TSS region transcription start site region 147447
1700001C07Rik 17 33685544 to 33685785 241 unclassified gene RIKEN cDNA 1700001C07 gene
March2 17 33685692 to 33718670 32978 - protein coding gene membrane-associated ring finger (C3HC4) 2
Tssr147448 17 33702297 to 33702302 5 - TSS region transcription start site region 147448
Tssr147449 17 33713353 to 33713364 11 - TSS region transcription start site region 147449
Tssr147450 17 33713372 to 33713390 18 - TSS region transcription start site region 147450
Cpgi9002 17 33718322 to 33718906 584 CpG island CpG island 9002
Tssr147451 17 33718637 to 33718690 53 - TSS region transcription start site region 147451
Tssr147452 17 33718695 to 33718712 17 - TSS region transcription start site region 147452
Gm22943 17 33729509 to 33729584 75 + snRNA gene predicted gene, 22943
D17Dcr5 17 33737735 to 33737853 118 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 5
Rab11b 17 33742484 to 33760486 18002 - protein coding gene RAB11B, member RAS oncogene family
Cpgi9003 17 33759730 to 33760678 948 CpG island CpG island 9003
Tssr143792 17 33759973 to 33760023 50 + TSS region transcription start site region 143792
Gm17251 17 33759992 to 33761870 1878 + unclassified non-coding RNA gene predicted gene, 17251
Tssr143793 17 33760030 to 33760054 24 + TSS region transcription start site region 143793
Tssr147453 17 33760315 to 33760348 33 - TSS region transcription start site region 147453
Tssr147454 17 33760357 to 33760395 38 - TSS region transcription start site region 147454
Tssr147455 17 33760451 to 33760498 47 - TSS region transcription start site region 147455
Tssr143794 17 33761067 to 33761072 5 + TSS region transcription start site region 143794
Angptl4 17 33774900 to 33781575 6675 - protein coding gene angiopoietin-like 4
Tssr147456 17 33780616 to 33780656 40 - TSS region transcription start site region 147456
Cpgi9004 17 33781075 to 33781888 813 CpG island CpG island 9004
Tssr147457 17 33781187 to 33781280 93 - TSS region transcription start site region 147457
Tssr147458 17 33781535 to 33781550 15 - TSS region transcription start site region 147458
4931413I07Rik 17 33783340 to 33785724 2384 - lincRNA gene RIKEN cDNA 4931413I07 gene
Tssr147459 17 33799327 to 33799335 8 - TSS region transcription start site region 147459
Cpgi9005 17 33810438 to 33811004 566 CpG island CpG island 9005
Tssr143795 17 33810515 to 33810529 14 + TSS region transcription start site region 143795
Kank3 17 33810523 to 33822920 12397 + protein coding gene KN motif and ankyrin repeat domains 3
D17Mit82 17 33810969 to 33811104 135 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 82
Sm2 17 33810969 to 33811104 135 QTL susceptibility to Schistosoma mansoni infection 2
Cpgi9006 17 33816937 to 33818438 1501 CpG island CpG island 9006
Tssr143796 17 33817705 to 33817716 11 + TSS region transcription start site region 143796
Tssr143797 17 33817806 to 33817834 28 + TSS region transcription start site region 143797
Tssr143798 17 33817835 to 33817866 31 + TSS region transcription start site region 143798
Rps28 17 33823036 to 33824562 1526 - protein coding gene ribosomal protein S28
Cpgi9007 17 33824231 to 33824934 703 CpG island CpG island 9007
Tssr147460 17 33824430 to 33824473 43 - TSS region transcription start site region 147460
Tssr147461 17 33824529 to 33824538 9 - TSS region transcription start site region 147461
Tssr143799 17 33824562 to 33824598 36 + TSS region transcription start site region 143799
Ndufa7 17 33824572 to 33838316 13744 + protein coding gene NADH:ubiquinone oxidoreductase subunit A7
Tssr143800 17 33824609 to 33824644 35 + TSS region transcription start site region 143800
Tssr143801 17 33824890 to 33824922 32 + TSS region transcription start site region 143801
Tssr143802 17 33829231 to 33829242 11 + TSS region transcription start site region 143802
Cpgi9008 17 33842965 to 33843594 629 CpG island CpG island 9008
Tssr143803 17 33843085 to 33843129 44 + TSS region transcription start site region 143803
Cd320 17 33843091 to 33849774 6683 + protein coding gene CD320 antigen
Tssr143804 17 33843137 to 33843156 19 + TSS region transcription start site region 143804
BE135129 17 33851039 to 33851542 503 DNA segment expressed sequence BE135129
Gm4134 17 33861302 to 33864228 2926 - pseudogene predicted gene 4134
Smim40-ps 17 33873837 to 33874082 245 + pseudogene small integral membrane protein 40, pseudogene
Kifc1 17 33875664 to 33890633 14969 - protein coding gene kinesin family member C1
Gm27740 17 33886676 to 33886733 57 - miRNA gene predicted gene, 27740
Cpgi9009 17 33890052 to 33891100 1048 CpG island CpG island 9009
Tssr147462 17 33890544 to 33890560 16 - TSS region transcription start site region 147462
Tssr147463 17 33890584 to 33890652 68 - TSS region transcription start site region 147463
Tssr143805 17 33893192 to 33893220 28 + TSS region transcription start site region 143805
Tssr147464 17 33904050 to 33904067 17 - TSS region transcription start site region 147464
Tssr143806 17 33905102 to 33905116 14 + TSS region transcription start site region 143806
Smim40 17 33905135 to 33906675 1540 + lincRNA gene small integral membrane protein 40
BC051226 17 33908182 to 33909178 996 - antisense lncRNA gene cDNA sequence BC051226
Tssr143807 17 33908392 to 33908410 18 + TSS region transcription start site region 143807
Cpgi9010 17 33908448 to 33910109 1661 CpG island CpG island 9010
Tssr147465 17 33909143 to 33909157 14 - TSS region transcription start site region 147465
Tssr147466 17 33909164 to 33909187 23 - TSS region transcription start site region 147466
Tssr147467 17 33909195 to 33909246 51 - TSS region transcription start site region 147467
Tssr147468 17 33909289 to 33909326 37 - TSS region transcription start site region 147468
Tssr143808 17 33909409 to 33909429 20 + TSS region transcription start site region 143808
Daxx 17 33909414 to 33915590 6176 + protein coding gene Fas death domain-associated protein
Tssr143809 17 33909481 to 33909576 95 + TSS region transcription start site region 143809
Tssr143810 17 33909577 to 33909600 23 + TSS region transcription start site region 143810
Tssr143811 17 33909603 to 33909612 9 + TSS region transcription start site region 143811
Tssr143812 17 33909622 to 33909643 21 + TSS region transcription start site region 143812
Tssr147469 17 33910120 to 33910147 27 - TSS region transcription start site region 147469
Tssr143813 17 33910246 to 33910261 15 + TSS region transcription start site region 143813
Tssr143814 17 33910317 to 33910335 18 + TSS region transcription start site region 143814
Tssr143815 17 33910391 to 33910418 27 + TSS region transcription start site region 143815
Tssr143816 17 33910423 to 33910445 22 + TSS region transcription start site region 143816
Tssr143817 17 33911491 to 33911536 45 + TSS region transcription start site region 143817
Tssr143818 17 33911984 to 33911999 15 + TSS region transcription start site region 143818
Tssr143819 17 33912722 to 33912726 4 + TSS region transcription start site region 143819
Cpgi9011 17 33915868 to 33916430 562 CpG island CpG island 9011
Tssr143820 17 33915905 to 33915916 11 + TSS region transcription start site region 143820
Zbtb22 17 33916176 to 33919325 3149 + protein coding gene zinc finger and BTB domain containing 22
Tssr143821 17 33916182 to 33916196 14 + TSS region transcription start site region 143821
Cpgi9012 17 33917058 to 33917253 195 CpG island CpG island 9012
Cpgi9013 17 33918340 to 33918938 598 CpG island CpG island 9013
Tssr143822 17 33919056 to 33919063 7 + TSS region transcription start site region 143822
Gm19412 17 33919279 to 33920485 1206 - antisense lncRNA gene predicted gene, 19412
Cpgi9014 17 33919375 to 33920606 1231 CpG island CpG island 9014
Tssr143823 17 33919470 to 33919477 7 + TSS region transcription start site region 143823
Tapbp 17 33919478 to 33929290 9812 + protein coding gene TAP binding protein
Tssr143824 17 33919486 to 33919498 12 + TSS region transcription start site region 143824
Tssr143825 17 33919563 to 33919579 16 + TSS region transcription start site region 143825
Tssr143826 17 33919597 to 33919617 20 + TSS region transcription start site region 143826
Tssr143827 17 33919619 to 33919628 9 + TSS region transcription start site region 143827
Tssr143828 17 33919645 to 33919676 31 + TSS region transcription start site region 143828
Tssr143829 17 33919679 to 33919690 11 + TSS region transcription start site region 143829
Tssr143830 17 33919725 to 33919736 11 + TSS region transcription start site region 143830
Tssr143831 17 33919827 to 33919833 6 + TSS region transcription start site region 143831
Tssr143832 17 33919862 to 33919877 15 + TSS region transcription start site region 143832
Tssr143833 17 33920242 to 33920337 95 + TSS region transcription start site region 143833
Tssr147470 17 33920343 to 33920372 29 - TSS region transcription start site region 147470
Tssr143834 17 33920398 to 33920414 16 + TSS region transcription start site region 143834
Tssr147471 17 33920470 to 33920500 30 - TSS region transcription start site region 147471
Tssr143835 17 33920490 to 33920514 24 + TSS region transcription start site region 143835
Tssr143836 17 33920522 to 33920554 32 + TSS region transcription start site region 143836