Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:33605030-33915054

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111 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Myo1f 17 33555707 to 33607764 52057 + protein coding gene myosin IF
Tssr147439 17 33607752 to 33607759 7 - TSS region transcription start site region 147439
Tssr143779 17 33608053 to 33608056 3 + TSS region transcription start site region 143779
Cpgi9000 17 33629029 to 33629374 345 CpG island CpG island 9000
Tssr143780 17 33629078 to 33629114 36 + TSS region transcription start site region 143780
Zfp414 17 33629092 to 33631716 2624 + protein coding gene zinc finger protein 414
Tssr143781 17 33629333 to 33629344 11 + TSS region transcription start site region 143781
Tssr5089 17 33629363 to 33629403 40 + TSS region transcription start site region 5089
Tssr143782 17 33629408 to 33629448 40 + TSS region transcription start site region 143782
Tssr143783 17 33629511 to 33629554 43 + TSS region transcription start site region 143783
Tssr143784 17 33629555 to 33629607 52 + TSS region transcription start site region 143784
Gm20507 17 33630759 to 33645705 14946 + unclassified non-coding RNA gene predicted gene 20507
Tssr143785 17 33637800 to 33637812 12 + TSS region transcription start site region 143785
Tssr143786 17 33637821 to 33637830 9 + TSS region transcription start site region 143786
Pram1 17 33638056 to 33645706 7650 + protein coding gene PML-RAR alpha-regulated adaptor molecule 1
Tssr143787 17 33638089 to 33638110 21 + TSS region transcription start site region 143787
Tssr143788 17 33638120 to 33638123 3 + TSS region transcription start site region 143788
Tssr143789 17 33638130 to 33638141 11 + TSS region transcription start site region 143789
Tssr147440 17 33639911 to 33639915 4 - TSS region transcription start site region 147440
Tssr143790 17 33641199 to 33641202 3 + TSS region transcription start site region 143790
Hnrnpm 17 33646233 to 33685458 39225 - protein coding gene heterogeneous nuclear ribonucleoprotein M
Tssr147441 17 33649716 to 33649735 19 - TSS region transcription start site region 147441
Tssr147442 17 33660267 to 33660294 27 - TSS region transcription start site region 147442
Tssr147443 17 33663248 to 33663289 41 - TSS region transcription start site region 147443
Tssr147444 17 33665533 to 33665554 21 - TSS region transcription start site region 147444
Tssr143791 17 33677370 to 33677410 40 + TSS region transcription start site region 143791
Tssr147445 17 33677437 to 33677442 5 - TSS region transcription start site region 147445
Cpgi9001 17 33684654 to 33685804 1150 CpG island CpG island 9001
Tssr147446 17 33685386 to 33685410 24 - TSS region transcription start site region 147446
Tssr147447 17 33685412 to 33685423 11 - TSS region transcription start site region 147447
1700001C07Rik 17 33685544 to 33685785 241 unclassified gene RIKEN cDNA 1700001C07 gene
March2 17 33685692 to 33718670 32978 - protein coding gene membrane-associated ring finger (C3HC4) 2
Tssr147448 17 33702297 to 33702302 5 - TSS region transcription start site region 147448
Tssr147449 17 33713353 to 33713364 11 - TSS region transcription start site region 147449
Tssr147450 17 33713372 to 33713390 18 - TSS region transcription start site region 147450
Cpgi9002 17 33718322 to 33718906 584 CpG island CpG island 9002
Tssr147451 17 33718637 to 33718690 53 - TSS region transcription start site region 147451
Tssr147452 17 33718695 to 33718712 17 - TSS region transcription start site region 147452
Gm22943 17 33729509 to 33729584 75 + snRNA gene predicted gene, 22943
D17Dcr5 17 33737735 to 33737853 118 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 5
Rab11b 17 33742484 to 33760486 18002 - protein coding gene RAB11B, member RAS oncogene family
Cpgi9003 17 33759730 to 33760678 948 CpG island CpG island 9003
Tssr143792 17 33759973 to 33760023 50 + TSS region transcription start site region 143792
Gm17251 17 33759992 to 33761870 1878 + unclassified non-coding RNA gene predicted gene, 17251
Tssr143793 17 33760030 to 33760054 24 + TSS region transcription start site region 143793
Tssr147453 17 33760315 to 33760348 33 - TSS region transcription start site region 147453
Tssr147454 17 33760357 to 33760395 38 - TSS region transcription start site region 147454
Tssr147455 17 33760451 to 33760498 47 - TSS region transcription start site region 147455
Tssr143794 17 33761067 to 33761072 5 + TSS region transcription start site region 143794
Angptl4 17 33774900 to 33781575 6675 - protein coding gene angiopoietin-like 4
Tssr147456 17 33780616 to 33780656 40 - TSS region transcription start site region 147456
Cpgi9004 17 33781075 to 33781888 813 CpG island CpG island 9004
Tssr147457 17 33781187 to 33781280 93 - TSS region transcription start site region 147457
Tssr147458 17 33781535 to 33781550 15 - TSS region transcription start site region 147458
4931413I07Rik 17 33783340 to 33785724 2384 - lincRNA gene RIKEN cDNA 4931413I07 gene
Tssr147459 17 33799327 to 33799335 8 - TSS region transcription start site region 147459
Cpgi9005 17 33810438 to 33811004 566 CpG island CpG island 9005
Tssr143795 17 33810515 to 33810529 14 + TSS region transcription start site region 143795
Kank3 17 33810523 to 33822920 12397 + protein coding gene KN motif and ankyrin repeat domains 3
D17Mit82 17 33810969 to 33811104 135 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 82
Sm2 17 33810969 to 33811104 135 QTL susceptibility to Schistosoma mansoni infection 2
Cpgi9006 17 33816937 to 33818438 1501 CpG island CpG island 9006
Tssr143796 17 33817705 to 33817716 11 + TSS region transcription start site region 143796
Tssr143797 17 33817806 to 33817834 28 + TSS region transcription start site region 143797
Tssr143798 17 33817835 to 33817866 31 + TSS region transcription start site region 143798
Rps28 17 33823036 to 33824562 1526 - protein coding gene ribosomal protein S28
Cpgi9007 17 33824231 to 33824934 703 CpG island CpG island 9007
Tssr147460 17 33824430 to 33824473 43 - TSS region transcription start site region 147460
Tssr147461 17 33824529 to 33824538 9 - TSS region transcription start site region 147461
Tssr143799 17 33824562 to 33824598 36 + TSS region transcription start site region 143799
Ndufa7 17 33824572 to 33838316 13744 + protein coding gene NADH:ubiquinone oxidoreductase subunit A7
Tssr143800 17 33824609 to 33824644 35 + TSS region transcription start site region 143800
Tssr143801 17 33824890 to 33824922 32 + TSS region transcription start site region 143801
Tssr143802 17 33829231 to 33829242 11 + TSS region transcription start site region 143802
Cpgi9008 17 33842965 to 33843594 629 CpG island CpG island 9008
Tssr143803 17 33843085 to 33843129 44 + TSS region transcription start site region 143803
Cd320 17 33843091 to 33849774 6683 + protein coding gene CD320 antigen
Tssr143804 17 33843137 to 33843156 19 + TSS region transcription start site region 143804
BE135129 17 33851039 to 33851542 503 DNA segment expressed sequence BE135129
Gm4134 17 33861302 to 33864228 2926 - pseudogene predicted gene 4134
Smim40-ps 17 33873837 to 33874082 245 + pseudogene small integral membrane protein 40, pseudogene
Kifc1 17 33875664 to 33890633 14969 - protein coding gene kinesin family member C1
Gm27740 17 33886676 to 33886733 57 - miRNA gene predicted gene, 27740
Cpgi9009 17 33890052 to 33891100 1048 CpG island CpG island 9009
Tssr147462 17 33890544 to 33890560 16 - TSS region transcription start site region 147462
Tssr147463 17 33890584 to 33890652 68 - TSS region transcription start site region 147463
Tssr143805 17 33893192 to 33893220 28 + TSS region transcription start site region 143805
Tssr147464 17 33904050 to 33904067 17 - TSS region transcription start site region 147464
Tssr143806 17 33905102 to 33905116 14 + TSS region transcription start site region 143806
Smim40 17 33905135 to 33906675 1540 + lincRNA gene small integral membrane protein 40
BC051226 17 33908182 to 33909178 996 - antisense lncRNA gene cDNA sequence BC051226
Tssr143807 17 33908392 to 33908410 18 + TSS region transcription start site region 143807
Cpgi9010 17 33908448 to 33910109 1661 CpG island CpG island 9010
Tssr147465 17 33909143 to 33909157 14 - TSS region transcription start site region 147465
Tssr147466 17 33909164 to 33909187 23 - TSS region transcription start site region 147466
Tssr147467 17 33909195 to 33909246 51 - TSS region transcription start site region 147467
Tssr147468 17 33909289 to 33909326 37 - TSS region transcription start site region 147468
Tssr143808 17 33909409 to 33909429 20 + TSS region transcription start site region 143808
Daxx 17 33909414 to 33915590 6176 + protein coding gene Fas death domain-associated protein
Tssr143809 17 33909481 to 33909576 95 + TSS region transcription start site region 143809
Tssr143810 17 33909577 to 33909600 23 + TSS region transcription start site region 143810
Tssr143811 17 33909603 to 33909612 9 + TSS region transcription start site region 143811
Tssr143812 17 33909622 to 33909643 21 + TSS region transcription start site region 143812
Tssr147469 17 33910120 to 33910147 27 - TSS region transcription start site region 147469
Tssr143813 17 33910246 to 33910261 15 + TSS region transcription start site region 143813
Tssr143814 17 33910317 to 33910335 18 + TSS region transcription start site region 143814
Tssr143815 17 33910391 to 33910418 27 + TSS region transcription start site region 143815
Tssr143816 17 33910423 to 33910445 22 + TSS region transcription start site region 143816
Tssr143817 17 33911491 to 33911536 45 + TSS region transcription start site region 143817
Tssr143818 17 33911984 to 33911999 15 + TSS region transcription start site region 143818
Tssr143819 17 33912722 to 33912726 4 + TSS region transcription start site region 143819