Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:33603353-33823364

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Myo1f 17 33555707 to 33607764 52057 + protein coding gene myosin IF
Tssr147439 17 33607752 to 33607759 7 - TSS region transcription start site region 147439
Tssr143779 17 33608053 to 33608056 3 + TSS region transcription start site region 143779
Cpgi9000 17 33629029 to 33629374 345 CpG island CpG island 9000
Tssr143780 17 33629078 to 33629114 36 + TSS region transcription start site region 143780
Zfp414 17 33629092 to 33631716 2624 + protein coding gene zinc finger protein 414
Tssr143781 17 33629333 to 33629344 11 + TSS region transcription start site region 143781
Tssr5089 17 33629363 to 33629403 40 + TSS region transcription start site region 5089
Tssr143782 17 33629408 to 33629448 40 + TSS region transcription start site region 143782
Tssr143783 17 33629511 to 33629554 43 + TSS region transcription start site region 143783
Tssr143784 17 33629555 to 33629607 52 + TSS region transcription start site region 143784
Gm20507 17 33630759 to 33645705 14946 + unclassified non-coding RNA gene predicted gene 20507
Tssr143785 17 33637800 to 33637812 12 + TSS region transcription start site region 143785
Tssr143786 17 33637821 to 33637830 9 + TSS region transcription start site region 143786
Pram1 17 33638056 to 33645706 7650 + protein coding gene PML-RAR alpha-regulated adaptor molecule 1
Tssr143787 17 33638089 to 33638110 21 + TSS region transcription start site region 143787
Tssr143788 17 33638120 to 33638123 3 + TSS region transcription start site region 143788
Tssr143789 17 33638130 to 33638141 11 + TSS region transcription start site region 143789
Tssr147440 17 33639911 to 33639915 4 - TSS region transcription start site region 147440
Tssr143790 17 33641199 to 33641202 3 + TSS region transcription start site region 143790
Hnrnpm 17 33646233 to 33685458 39225 - protein coding gene heterogeneous nuclear ribonucleoprotein M
Tssr147441 17 33649716 to 33649735 19 - TSS region transcription start site region 147441
Tssr147442 17 33660267 to 33660294 27 - TSS region transcription start site region 147442
Tssr147443 17 33663248 to 33663289 41 - TSS region transcription start site region 147443
Tssr147444 17 33665533 to 33665554 21 - TSS region transcription start site region 147444
Tssr143791 17 33677370 to 33677410 40 + TSS region transcription start site region 143791
Tssr147445 17 33677437 to 33677442 5 - TSS region transcription start site region 147445
Cpgi9001 17 33684654 to 33685804 1150 CpG island CpG island 9001
Tssr147446 17 33685386 to 33685410 24 - TSS region transcription start site region 147446
Tssr147447 17 33685412 to 33685423 11 - TSS region transcription start site region 147447
1700001C07Rik 17 33685544 to 33685785 241 unclassified gene RIKEN cDNA 1700001C07 gene
March2 17 33685692 to 33718670 32978 - protein coding gene membrane-associated ring finger (C3HC4) 2
Tssr147448 17 33702297 to 33702302 5 - TSS region transcription start site region 147448
Tssr147449 17 33713353 to 33713364 11 - TSS region transcription start site region 147449
Tssr147450 17 33713372 to 33713390 18 - TSS region transcription start site region 147450
Cpgi9002 17 33718322 to 33718906 584 CpG island CpG island 9002
Tssr147451 17 33718637 to 33718690 53 - TSS region transcription start site region 147451
Tssr147452 17 33718695 to 33718712 17 - TSS region transcription start site region 147452
Gm22943 17 33729509 to 33729584 75 + snRNA gene predicted gene, 22943
D17Dcr5 17 33737735 to 33737853 118 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 5
Rab11b 17 33742484 to 33760486 18002 - protein coding gene RAB11B, member RAS oncogene family
Cpgi9003 17 33759730 to 33760678 948 CpG island CpG island 9003
Tssr143792 17 33759973 to 33760023 50 + TSS region transcription start site region 143792
Gm17251 17 33759992 to 33761870 1878 + unclassified non-coding RNA gene predicted gene, 17251
Tssr143793 17 33760030 to 33760054 24 + TSS region transcription start site region 143793
Tssr147453 17 33760315 to 33760348 33 - TSS region transcription start site region 147453
Tssr147454 17 33760357 to 33760395 38 - TSS region transcription start site region 147454
Tssr147455 17 33760451 to 33760498 47 - TSS region transcription start site region 147455
Tssr143794 17 33761067 to 33761072 5 + TSS region transcription start site region 143794
Angptl4 17 33774900 to 33781575 6675 - protein coding gene angiopoietin-like 4
Tssr147456 17 33780616 to 33780656 40 - TSS region transcription start site region 147456
Cpgi9004 17 33781075 to 33781888 813 CpG island CpG island 9004
Tssr147457 17 33781187 to 33781280 93 - TSS region transcription start site region 147457
Tssr147458 17 33781535 to 33781550 15 - TSS region transcription start site region 147458
4931413I07Rik 17 33783340 to 33785724 2384 - lincRNA gene RIKEN cDNA 4931413I07 gene
Tssr147459 17 33799327 to 33799335 8 - TSS region transcription start site region 147459
Cpgi9005 17 33810438 to 33811004 566 CpG island CpG island 9005
Tssr143795 17 33810515 to 33810529 14 + TSS region transcription start site region 143795
Kank3 17 33810523 to 33822920 12397 + protein coding gene KN motif and ankyrin repeat domains 3
Sm2 17 33810969 to 33811104 135 QTL susceptibility to Schistosoma mansoni infection 2
D17Mit82 17 33810969 to 33811104 135 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 82
Cpgi9006 17 33816937 to 33818438 1501 CpG island CpG island 9006
Tssr143796 17 33817705 to 33817716 11 + TSS region transcription start site region 143796
Tssr143797 17 33817806 to 33817834 28 + TSS region transcription start site region 143797
Tssr143798 17 33817835 to 33817866 31 + TSS region transcription start site region 143798
Rps28 17 33823036 to 33824562 1526 - protein coding gene ribosomal protein S28