Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:32853066-33483178

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92 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm50050 17 32863662 to 32877942 14280 - lincRNA gene predicted gene, 50050
Gm18273 17 32864649 to 32865897 1248 + pseudogene predicted gene, 18273
Tssr147411 17 32871614 to 32871624 10 - TSS region transcription start site region 147411
Tssr147412 17 32872246 to 32872251 5 - TSS region transcription start site region 147412
Tssr143740 17 32877517 to 32877518 1 + TSS region transcription start site region 143740
Tssr147413 17 32877872 to 32877914 42 - TSS region transcription start site region 147413
Tssr147414 17 32877925 to 32877946 21 - TSS region transcription start site region 147414
Tssr143741 17 32878044 to 32878051 7 + TSS region transcription start site region 143741
Tssr143742 17 32878063 to 32878088 25 + TSS region transcription start site region 143742
Tssr143743 17 32879104 to 32879118 14 + TSS region transcription start site region 143743
Tssr143744 17 32879126 to 32879133 7 + TSS region transcription start site region 143744
Zfp870 17 32879221 to 32891603 12382 - protein coding gene zinc finger protein 870
Gm50051 17 32879221 to 32880304 1083 + antisense lncRNA gene predicted gene, 50051
Cpgi8987 17 32891085 to 32891495 410 CpG island CpG island 8987
Tssr147415 17 32891549 to 32891565 16 - TSS region transcription start site region 147415
Tssr147416 17 32891570 to 32891646 76 - TSS region transcription start site region 147416
Tssr143745 17 32891781 to 32891797 16 + TSS region transcription start site region 143745
D17Mit192 17 32892880 to 32893026 146 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 192
Tssr147417 17 32895442 to 32895454 12 - TSS region transcription start site region 147417
Tssr143746 17 32902429 to 32902440 11 + TSS region transcription start site region 143746
Cyp4f14 17 32905070 to 32917342 12272 - protein coding gene cytochrome P450, family 4, subfamily f, polypeptide 14
Cpgi8988 17 32905437 to 32905806 369 CpG island CpG island 8988
Tssr147418 17 32916996 to 32917003 7 - TSS region transcription start site region 147418
Tssr147419 17 32917017 to 32917022 5 - TSS region transcription start site region 147419
Tssr147420 17 32917031 to 32917042 11 - TSS region transcription start site region 147420
Tssr147421 17 32917048 to 32917118 70 - TSS region transcription start site region 147421
Tssr147422 17 32917193 to 32917197 4 - TSS region transcription start site region 147422
Tssr147423 17 32917220 to 32917227 7 - TSS region transcription start site region 147423
Tssr147424 17 32917320 to 32917342 22 - TSS region transcription start site region 147424
Cyp4f13 17 32924688 to 32947402 22714 - protein coding gene cytochrome P450, family 4, subfamily f, polypeptide 13
Cpgi8989 17 32924718 to 32925146 428 CpG island CpG island 8989
Tssr147425 17 32947350 to 32947368 18 - TSS region transcription start site region 147425
Tssr147426 17 32947372 to 32947387 15 - TSS region transcription start site region 147426
Tssr147427 17 32947389 to 32947395 6 - TSS region transcription start site region 147427
Cyp4f41-ps 17 32950961 to 32965716 14755 - pseudogene cytochrome P450, family 4, subfamily f, polypeptide 41 pseudogene
Cpgi8990 17 32951588 to 32952005 417 CpG island CpG island 8990
Gm25667 17 32956610 to 32956884 274 - unclassified non-coding RNA gene predicted gene, 25667
Tssr147428 17 32965706 to 32965717 11 - TSS region transcription start site region 147428
Tssr147429 17 32965721 to 32965733 12 - TSS region transcription start site region 147429
Cpgi8991 17 32965736 to 32966328 592 CpG island CpG island 8991
Tssr143747 17 32965797 to 32965826 29 + TSS region transcription start site region 143747
Tssr143748 17 32965830 to 32965852 22 + TSS region transcription start site region 143748
Zfp472 17 32965831 to 32979211 13380 + protein coding gene zinc finger protein 472
Tssr143749 17 32971603 to 32971606 3 + TSS region transcription start site region 143749
Cpgi8992 17 32993067 to 32993557 490 CpG island CpG island 8992
Tssr143750 17 32993123 to 32993160 37 + TSS region transcription start site region 143750
Zfp952 17 32993129 to 33005457 12328 + protein coding gene zinc finger protein 952
Tssr143751 17 32993169 to 32993178 9 + TSS region transcription start site region 143751
Zfp763 17 33016864 to 33033381 16517 - protein coding gene zinc finger protein 763
Cpgi8993 17 33032977 to 33033459 482 CpG island CpG island 8993
Tssr147430 17 33033367 to 33033411 44 - TSS region transcription start site region 147430
Phf8-ps 17 33064143 to 33068058 3915 - pseudogene PHD finger protein 8, pseudogene
Tssr147431 17 33068002 to 33068007 5 - TSS region transcription start site region 147431
Tssr147432 17 33068035 to 33068043 8 - TSS region transcription start site region 147432
Cpgi8994 17 33089264 to 33089758 494 CpG island CpG island 8994
Zfp563 17 33089367 to 33110705 21338 + protein coding gene zinc finger protein 563
Cpgi8995 17 33092414 to 33092881 467 CpG island CpG island 8995
Tssr143752 17 33092446 to 33092497 51 + TSS region transcription start site region 143752
Gm41572 17 33111228 to 33118280 7052 - lncRNA gene predicted gene, 41572
Morc2b 17 33135588 to 33150499 14911 - protein coding gene microrchidia 2B
Tssr143753 17 33139499 to 33139509 10 + TSS region transcription start site region 143753
Tssr147433 17 33139617 to 33139670 53 - TSS region transcription start site region 147433
Tssr147434 17 33139672 to 33139675 3 - TSS region transcription start site region 147434
Cpgi8996 17 33139706 to 33139907 201 CpG island CpG island 8996
Tssr143754 17 33139731 to 33139740 9 + TSS region transcription start site region 143754
Gm21062 17 33144149 to 33148199 4050 + protein coding gene predicted gene, 21062
D17Ertd29e 17 33150164 to 33150413 249 DNA segment DNA segment, Chr 17, ERATO Doi 29, expressed
D17Mit147a 17 33168066 to 33168178 112 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 147a
Olfr55 17 33176416 to 33177363 947 + protein coding gene olfactory receptor 55
D17Mit147b 17 33190738 to 33190864 126 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 147b
Olfr239 17 33199062 to 33200009 947 + protein coding gene olfactory receptor 239
Olfr1564 17 33215261 to 33216351 1090 - protein coding gene olfactory receptor 1564
Zfp955a 17 33239718 to 33255145 15427 - protein coding gene zinc finger protein 955A
Olfr63 17 33268726 to 33269676 950 + protein coding gene olfactory receptor 63
Zfp955b 17 33289544 to 33304689 15145 + protein coding gene zinc finger protein 955B
Zfp422-ps 17 33305039 to 33305745 706 - pseudogene zinc finger protein 422, pseudogene
Tssr147435 17 33305846 to 33305863 17 - TSS region transcription start site region 147435
Zfp81 17 33333728 to 33358878 25150 - protein coding gene zinc finger protein 81
Cpgi8997 17 33358270 to 33358984 714 CpG island CpG island 8997
Tssr147436 17 33358832 to 33358886 54 - TSS region transcription start site region 147436
Zfp101 17 33380174 to 33394637 14463 - protein coding gene zinc finger protein 101
Cpgi8998 17 33394164 to 33394739 575 CpG island CpG island 8998
Tssr147437 17 33394568 to 33394644 76 - TSS region transcription start site region 147437
Tssr147438 17 33394662 to 33394673 11 - TSS region transcription start site region 147438
Tssr143755 17 33432189 to 33432205 16 + TSS region transcription start site region 143755
Tssr143756 17 33432216 to 33432236 20 + TSS region transcription start site region 143756
Tssr143757 17 33432259 to 33432266 7 + TSS region transcription start site region 143757
Tssr143758 17 33432283 to 33432290 7 + TSS region transcription start site region 143758
Tssr143759 17 33432302 to 33432308 6 + TSS region transcription start site region 143759
Tssr143760 17 33432890 to 33432911 21 + TSS region transcription start site region 143760
Actl9 17 33432899 to 33434268 1369 + protein coding gene actin-like 9
Gm4125 17 33467866 to 33468602 736 - pseudogene predicted gene 4125