Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:32727189-34137205

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481 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Radpf1 17 16615193 to 33600869 16985676 QTL radiation pulmonary fibrosis 1
Gm50046 17 32729528 to 32754198 24670 - lincRNA gene predicted gene, 50046
Tssr143738 17 32730980 to 32730988 8 + TSS region transcription start site region 143738
Gm6452 17 32731010 to 32731806 796 + pseudogene predicted gene 6452
Gm17948 17 32745182 to 32745819 637 + pseudogene predicted gene, 17948
Zfp871 17 32765496 to 32788287 22791 - protein coding gene zinc finger protein 871
Tssr147395 17 32767182 to 32767215 33 - TSS region transcription start site region 147395
Tssr147396 17 32769337 to 32769351 14 - TSS region transcription start site region 147396
Tssr147397 17 32787085 to 32787088 3 - TSS region transcription start site region 147397
Cpgi8985 17 32787701 to 32788445 744 CpG island CpG island 8985
Tssr147398 17 32788238 to 32788260 22 - TSS region transcription start site region 147398
Tssr147399 17 32788264 to 32788283 19 - TSS region transcription start site region 147399
Tssr147400 17 32788284 to 32788297 13 - TSS region transcription start site region 147400
Gm17115 17 32788394 to 32789591 1197 + antisense lncRNA gene predicted gene 17115
Zfp811 17 32795676 to 32809931 14255 - protein coding gene zinc finger protein 811
Gm23294 17 32800567 to 32800730 163 - snRNA gene predicted gene, 23294
Gm25555 17 32804867 to 32804977 110 - rRNA gene predicted gene, 25555
Tssr147401 17 32805698 to 32805710 12 - TSS region transcription start site region 147401
A930009K04Rik 17 32806022 to 32806265 243 unclassified gene RIKEN cDNA A930009K04 gene
Tssr147402 17 32809000 to 32809042 42 - TSS region transcription start site region 147402
Tssr147403 17 32809840 to 32809856 16 - TSS region transcription start site region 147403
Tssr147404 17 32809878 to 32809940 62 - TSS region transcription start site region 147404
Tssr143739 17 32810117 to 32810147 30 + TSS region transcription start site region 143739
Gm26693 17 32810144 to 32821697 11553 + antisense lncRNA gene predicted gene, 26693
Tssr147405 17 32810673 to 32810682 9 - TSS region transcription start site region 147405
Tssr147406 17 32810696 to 32810721 25 - TSS region transcription start site region 147406
Tssr147407 17 32810734 to 32810775 41 - TSS region transcription start site region 147407
Tssr147408 17 32810787 to 32810801 14 - TSS region transcription start site region 147408
Tssr5087 17 32811591 to 32811593 2 + TSS region transcription start site region 5087
Tssr147409 17 32812473 to 32812474 1 - TSS region transcription start site region 147409
Zfp799 17 32815449 to 32830261 14812 - protein coding gene zinc finger protein 799
Cpgi8986 17 32829757 to 32830325 568 CpG island CpG island 8986
Tssr147410 17 32830195 to 32830252 57 - TSS region transcription start site region 147410
Gm18272 17 32841313 to 32841646 333 + pseudogene predicted gene, 18272
Gm7059 17 32852205 to 32853020 815 - pseudogene predicted gene 7059
Gm50050 17 32863662 to 32877942 14280 - lincRNA gene predicted gene, 50050
Gm18273 17 32864649 to 32865897 1248 + pseudogene predicted gene, 18273
Tssr147411 17 32871614 to 32871624 10 - TSS region transcription start site region 147411
Tssr147412 17 32872246 to 32872251 5 - TSS region transcription start site region 147412
Tssr143740 17 32877517 to 32877518 1 + TSS region transcription start site region 143740
Tssr147413 17 32877872 to 32877914 42 - TSS region transcription start site region 147413
Tssr147414 17 32877925 to 32877946 21 - TSS region transcription start site region 147414
Tssr143741 17 32878044 to 32878051 7 + TSS region transcription start site region 143741
Tssr143742 17 32878063 to 32878088 25 + TSS region transcription start site region 143742
Tssr143743 17 32879104 to 32879118 14 + TSS region transcription start site region 143743
Tssr143744 17 32879126 to 32879133 7 + TSS region transcription start site region 143744
Gm50051 17 32879221 to 32880304 1083 + antisense lncRNA gene predicted gene, 50051
Zfp870 17 32879221 to 32891603 12382 - protein coding gene zinc finger protein 870
Cpgi8987 17 32891085 to 32891495 410 CpG island CpG island 8987
Tssr147415 17 32891549 to 32891565 16 - TSS region transcription start site region 147415
Tssr147416 17 32891570 to 32891646 76 - TSS region transcription start site region 147416
Tssr143745 17 32891781 to 32891797 16 + TSS region transcription start site region 143745
D17Mit192 17 32892880 to 32893026 146 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 192
Tssr147417 17 32895442 to 32895454 12 - TSS region transcription start site region 147417
Tssr143746 17 32902429 to 32902440 11 + TSS region transcription start site region 143746
Cyp4f14 17 32905070 to 32917342 12272 - protein coding gene cytochrome P450, family 4, subfamily f, polypeptide 14
Cpgi8988 17 32905437 to 32905806 369 CpG island CpG island 8988
Tssr147418 17 32916996 to 32917003 7 - TSS region transcription start site region 147418
Tssr147419 17 32917017 to 32917022 5 - TSS region transcription start site region 147419
Tssr147420 17 32917031 to 32917042 11 - TSS region transcription start site region 147420
Tssr147421 17 32917048 to 32917118 70 - TSS region transcription start site region 147421
Tssr147422 17 32917193 to 32917197 4 - TSS region transcription start site region 147422
Tssr147423 17 32917220 to 32917227 7 - TSS region transcription start site region 147423
Tssr147424 17 32917320 to 32917342 22 - TSS region transcription start site region 147424
Cyp4f13 17 32924688 to 32947402 22714 - protein coding gene cytochrome P450, family 4, subfamily f, polypeptide 13
Cpgi8989 17 32924718 to 32925146 428 CpG island CpG island 8989
Tssr147425 17 32947350 to 32947368 18 - TSS region transcription start site region 147425
Tssr147426 17 32947372 to 32947387 15 - TSS region transcription start site region 147426
Tssr147427 17 32947389 to 32947395 6 - TSS region transcription start site region 147427
Cyp4f41-ps 17 32950961 to 32965716 14755 - pseudogene cytochrome P450, family 4, subfamily f, polypeptide 41 pseudogene
Cpgi8990 17 32951588 to 32952005 417 CpG island CpG island 8990
Gm25667 17 32956610 to 32956884 274 - unclassified non-coding RNA gene predicted gene, 25667
Tssr147428 17 32965706 to 32965717 11 - TSS region transcription start site region 147428
Tssr147429 17 32965721 to 32965733 12 - TSS region transcription start site region 147429
Cpgi8991 17 32965736 to 32966328 592 CpG island CpG island 8991
Tssr143747 17 32965797 to 32965826 29 + TSS region transcription start site region 143747
Tssr143748 17 32965830 to 32965852 22 + TSS region transcription start site region 143748
Zfp472 17 32965831 to 32979211 13380 + protein coding gene zinc finger protein 472
Tssr143749 17 32971603 to 32971606 3 + TSS region transcription start site region 143749
Cpgi8992 17 32993067 to 32993557 490 CpG island CpG island 8992
Tssr143750 17 32993123 to 32993160 37 + TSS region transcription start site region 143750
Zfp952 17 32993129 to 33005457 12328 + protein coding gene zinc finger protein 952
Tssr143751 17 32993169 to 32993178 9 + TSS region transcription start site region 143751
Zfp763 17 33016864 to 33033381 16517 - protein coding gene zinc finger protein 763
Cpgi8993 17 33032977 to 33033459 482 CpG island CpG island 8993
Tssr147430 17 33033367 to 33033411 44 - TSS region transcription start site region 147430
Phf8-ps 17 33064143 to 33068058 3915 - pseudogene PHD finger protein 8, pseudogene
Tssr147431 17 33068002 to 33068007 5 - TSS region transcription start site region 147431
Tssr147432 17 33068035 to 33068043 8 - TSS region transcription start site region 147432
Cpgi8994 17 33089264 to 33089758 494 CpG island CpG island 8994
Zfp563 17 33089367 to 33110705 21338 + protein coding gene zinc finger protein 563
Cpgi8995 17 33092414 to 33092881 467 CpG island CpG island 8995
Tssr143752 17 33092446 to 33092497 51 + TSS region transcription start site region 143752
Gm41572 17 33111228 to 33118280 7052 - lncRNA gene predicted gene, 41572
Morc2b 17 33135588 to 33150499 14911 - protein coding gene microrchidia 2B
Tssr143753 17 33139499 to 33139509 10 + TSS region transcription start site region 143753
Tssr147433 17 33139617 to 33139670 53 - TSS region transcription start site region 147433
Tssr147434 17 33139672 to 33139675 3 - TSS region transcription start site region 147434
Cpgi8996 17 33139706 to 33139907 201 CpG island CpG island 8996
Tssr143754 17 33139731 to 33139740 9 + TSS region transcription start site region 143754
Gm21062 17 33144149 to 33148199 4050 + protein coding gene predicted gene, 21062
D17Ertd29e 17 33150164 to 33150413 249 DNA segment DNA segment, Chr 17, ERATO Doi 29, expressed
D17Mit147a 17 33168066 to 33168178 112 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 147a
Olfr55 17 33176416 to 33177363 947 + protein coding gene olfactory receptor 55
D17Mit147b 17 33190738 to 33190864 126 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 147b
Olfr239 17 33199062 to 33200009 947 + protein coding gene olfactory receptor 239
Olfr1564 17 33215261 to 33216351 1090 - protein coding gene olfactory receptor 1564
Zfp955a 17 33239718 to 33255145 15427 - protein coding gene zinc finger protein 955A
Olfr63 17 33268726 to 33269676 950 + protein coding gene olfactory receptor 63
Zfp955b 17 33289544 to 33304689 15145 + protein coding gene zinc finger protein 955B
Zfp422-ps 17 33305039 to 33305745 706 - pseudogene zinc finger protein 422, pseudogene
Tssr147435 17 33305846 to 33305863 17 - TSS region transcription start site region 147435
Zfp81 17 33333728 to 33358878 25150 - protein coding gene zinc finger protein 81
Cpgi8997 17 33358270 to 33358984 714 CpG island CpG island 8997
Tssr147436 17 33358832 to 33358886 54 - TSS region transcription start site region 147436
Zfp101 17 33380174 to 33394637 14463 - protein coding gene zinc finger protein 101
Cpgi8998 17 33394164 to 33394739 575 CpG island CpG island 8998
Tssr147437 17 33394568 to 33394644 76 - TSS region transcription start site region 147437
Tssr147438 17 33394662 to 33394673 11 - TSS region transcription start site region 147438
Tssr143755 17 33432189 to 33432205 16 + TSS region transcription start site region 143755
Tssr143756 17 33432216 to 33432236 20 + TSS region transcription start site region 143756
Tssr143757 17 33432259 to 33432266 7 + TSS region transcription start site region 143757
Tssr143758 17 33432283 to 33432290 7 + TSS region transcription start site region 143758
Tssr143759 17 33432302 to 33432308 6 + TSS region transcription start site region 143759
Tssr143760 17 33432890 to 33432911 21 + TSS region transcription start site region 143760
Actl9 17 33432899 to 33434268 1369 + protein coding gene actin-like 9
Gm4125 17 33467866 to 33468602 736 - pseudogene predicted gene 4125
Cpgi8999 17 33523967 to 33524514 547 CpG island CpG island 8999
Tssr143761 17 33524109 to 33524118 9 + TSS region transcription start site region 143761
Tssr143762 17 33524170 to 33524231 61 + TSS region transcription start site region 143762
Adamts10 17 33524204 to 33553782 29578 + protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
Tssr5088 17 33552070 to 33552072 2 + TSS region transcription start site region 5088
Myo1f 17 33555707 to 33607764 52057 + protein coding gene myosin IF
Tssr143763 17 33555727 to 33555796 69 + TSS region transcription start site region 143763
Tssr143764 17 33556365 to 33556378 13 + TSS region transcription start site region 143764
Tssr143765 17 33556385 to 33556404 19 + TSS region transcription start site region 143765
Tssr143766 17 33557191 to 33557205 14 + TSS region transcription start site region 143766
Tssr143767 17 33557757 to 33557806 49 + TSS region transcription start site region 143767
Tssr143768 17 33558847 to 33558862 15 + TSS region transcription start site region 143768
Tssr143769 17 33576607 to 33576640 33 + TSS region transcription start site region 143769
Tssr143770 17 33577907 to 33577909 2 + TSS region transcription start site region 143770
Tssr143771 17 33578135 to 33578144 9 + TSS region transcription start site region 143771
Tssr143772 17 33584290 to 33584302 12 + TSS region transcription start site region 143772
Tssr143773 17 33584322 to 33584362 40 + TSS region transcription start site region 143773
Tssr143774 17 33587330 to 33587353 23 + TSS region transcription start site region 143774
Tssr143775 17 33591245 to 33591257 12 + TSS region transcription start site region 143775
Tssr143776 17 33594494 to 33594506 12 + TSS region transcription start site region 143776
Tssr143777 17 33594541 to 33594548 7 + TSS region transcription start site region 143777
Tssr143778 17 33600708 to 33600752 44 + TSS region transcription start site region 143778
D17Dcr4 17 33600732 to 33600848 116 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 4
Skull25 17 33600747 to 33600869 122 QTL skull morphology 25
D17Mit16 17 33600747 to 33600869 122 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 16
Wta4 17 33600747 to 33600869 122 QTL weight adult 4
Dps3 17 33600747 to 35939288 2338541 QTL delta power in slow-wave sleep 3
Tssr147439 17 33607752 to 33607759 7 - TSS region transcription start site region 147439
Tssr143779 17 33608053 to 33608056 3 + TSS region transcription start site region 143779
Cpgi9000 17 33629029 to 33629374 345 CpG island CpG island 9000
Tssr143780 17 33629078 to 33629114 36 + TSS region transcription start site region 143780
Zfp414 17 33629092 to 33631716 2624 + protein coding gene zinc finger protein 414
Tssr143781 17 33629333 to 33629344 11 + TSS region transcription start site region 143781
Tssr5089 17 33629363 to 33629403 40 + TSS region transcription start site region 5089
Tssr143782 17 33629408 to 33629448 40 + TSS region transcription start site region 143782
Tssr143783 17 33629511 to 33629554 43 + TSS region transcription start site region 143783
Tssr143784 17 33629555 to 33629607 52 + TSS region transcription start site region 143784
Gm20507 17 33630759 to 33645705 14946 + unclassified non-coding RNA gene predicted gene 20507
Tssr143785 17 33637800 to 33637812 12 + TSS region transcription start site region 143785
Tssr143786 17 33637821 to 33637830 9 + TSS region transcription start site region 143786
Pram1 17 33638056 to 33645706 7650 + protein coding gene PML-RAR alpha-regulated adaptor molecule 1
Tssr143787 17 33638089 to 33638110 21 + TSS region transcription start site region 143787
Tssr143788 17 33638120 to 33638123 3 + TSS region transcription start site region 143788
Tssr143789 17 33638130 to 33638141 11 + TSS region transcription start site region 143789
Tssr147440 17 33639911 to 33639915 4 - TSS region transcription start site region 147440
Tssr143790 17 33641199 to 33641202 3 + TSS region transcription start site region 143790
Hnrnpm 17 33646233 to 33685458 39225 - protein coding gene heterogeneous nuclear ribonucleoprotein M
Tssr147441 17 33649716 to 33649735 19 - TSS region transcription start site region 147441
Tssr147442 17 33660267 to 33660294 27 - TSS region transcription start site region 147442
Tssr147443 17 33663248 to 33663289 41 - TSS region transcription start site region 147443
Tssr147444 17 33665533 to 33665554 21 - TSS region transcription start site region 147444
Tssr143791 17 33677370 to 33677410 40 + TSS region transcription start site region 143791
Tssr147445 17 33677437 to 33677442 5 - TSS region transcription start site region 147445
Cpgi9001 17 33684654 to 33685804 1150 CpG island CpG island 9001
Tssr147446 17 33685386 to 33685410 24 - TSS region transcription start site region 147446
Tssr147447 17 33685412 to 33685423 11 - TSS region transcription start site region 147447
1700001C07Rik 17 33685544 to 33685785 241 unclassified gene RIKEN cDNA 1700001C07 gene
March2 17 33685692 to 33718670 32978 - protein coding gene membrane-associated ring finger (C3HC4) 2
Tssr147448 17 33702297 to 33702302 5 - TSS region transcription start site region 147448
Tssr147449 17 33713353 to 33713364 11 - TSS region transcription start site region 147449
Tssr147450 17 33713372 to 33713390 18 - TSS region transcription start site region 147450
Cpgi9002 17 33718322 to 33718906 584 CpG island CpG island 9002
Tssr147451 17 33718637 to 33718690 53 - TSS region transcription start site region 147451
Tssr147452 17 33718695 to 33718712 17 - TSS region transcription start site region 147452
Gm22943 17 33729509 to 33729584 75 + snRNA gene predicted gene, 22943
D17Dcr5 17 33737735 to 33737853 118 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 5
Rab11b 17 33742484 to 33760486 18002 - protein coding gene RAB11B, member RAS oncogene family
Cpgi9003 17 33759730 to 33760678 948 CpG island CpG island 9003
Tssr143792 17 33759973 to 33760023 50 + TSS region transcription start site region 143792
Gm17251 17 33759992 to 33761870 1878 + unclassified non-coding RNA gene predicted gene, 17251
Tssr143793 17 33760030 to 33760054 24 + TSS region transcription start site region 143793
Tssr147453 17 33760315 to 33760348 33 - TSS region transcription start site region 147453
Tssr147454 17 33760357 to 33760395 38 - TSS region transcription start site region 147454