Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:32670182-32820819

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cyp4f40 17 32658900 to 32676914 18014 + protein coding gene cytochrome P450, family 4, subfamily f, polypeptide 40
Cpgi8983 17 32676202 to 32676565 363 CpG island CpG island 8983
Tssr143733 17 32685585 to 32685596 11 + TSS region transcription start site region 143733
Tssr143734 17 32685610 to 32685615 5 + TSS region transcription start site region 143734
Cyp4f15 17 32685627 to 32703352 17725 + protein coding gene cytochrome P450, family 4, subfamily f, polypeptide 15
Tssr143735 17 32685639 to 32685643 4 + TSS region transcription start site region 143735
Tssr143736 17 32685655 to 32685677 22 + TSS region transcription start site region 143736
Tssr143737 17 32686093 to 32686106 13 + TSS region transcription start site region 143737
Cpgi8984 17 32702717 to 32703067 350 CpG island CpG island 8984
Gm50046 17 32729528 to 32754198 24670 - lincRNA gene predicted gene, 50046
Tssr143738 17 32730980 to 32730988 8 + TSS region transcription start site region 143738
Gm6452 17 32731010 to 32731806 796 + pseudogene predicted gene 6452
Gm17948 17 32745182 to 32745819 637 + pseudogene predicted gene, 17948
Zfp871 17 32765496 to 32788287 22791 - protein coding gene zinc finger protein 871
Tssr147395 17 32767182 to 32767215 33 - TSS region transcription start site region 147395
Tssr147396 17 32769337 to 32769351 14 - TSS region transcription start site region 147396
Tssr147397 17 32787085 to 32787088 3 - TSS region transcription start site region 147397
Cpgi8985 17 32787701 to 32788445 744 CpG island CpG island 8985
Tssr147398 17 32788238 to 32788260 22 - TSS region transcription start site region 147398
Tssr147399 17 32788264 to 32788283 19 - TSS region transcription start site region 147399
Tssr147400 17 32788284 to 32788297 13 - TSS region transcription start site region 147400
Gm17115 17 32788394 to 32789591 1197 + antisense lncRNA gene predicted gene 17115
Zfp811 17 32795676 to 32809931 14255 - protein coding gene zinc finger protein 811
Gm23294 17 32800567 to 32800730 163 - snRNA gene predicted gene, 23294
Gm25555 17 32804867 to 32804977 110 - rRNA gene predicted gene, 25555
Tssr147401 17 32805698 to 32805710 12 - TSS region transcription start site region 147401
A930009K04Rik 17 32806022 to 32806265 243 unclassified gene RIKEN cDNA A930009K04 gene
Tssr147402 17 32809000 to 32809042 42 - TSS region transcription start site region 147402
Tssr147403 17 32809840 to 32809856 16 - TSS region transcription start site region 147403
Tssr147404 17 32809878 to 32809940 62 - TSS region transcription start site region 147404
Tssr143739 17 32810117 to 32810147 30 + TSS region transcription start site region 143739
Gm26693 17 32810144 to 32821697 11553 + antisense lncRNA gene predicted gene, 26693
Tssr147405 17 32810673 to 32810682 9 - TSS region transcription start site region 147405
Tssr147406 17 32810696 to 32810721 25 - TSS region transcription start site region 147406
Tssr147407 17 32810734 to 32810775 41 - TSS region transcription start site region 147407
Tssr147408 17 32810787 to 32810801 14 - TSS region transcription start site region 147408
Tssr5087 17 32811591 to 32811593 2 + TSS region transcription start site region 5087
Tssr147409 17 32812473 to 32812474 1 - TSS region transcription start site region 147409
Zfp799 17 32815449 to 32830261 14812 - protein coding gene zinc finger protein 799