Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:32650567-32950730

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cyp4f38-ps 17 32642725 to 32653196 10471 + pseudogene cytochrome P450, family 4, subfamily f, member 38, pseudogene
Tssr143725 17 32658878 to 32658913 35 + TSS region transcription start site region 143725
Cyp4f40 17 32658900 to 32676914 18014 + protein coding gene cytochrome P450, family 4, subfamily f, polypeptide 40
Tssr143726 17 32658966 to 32658977 11 + TSS region transcription start site region 143726
Tssr143727 17 32658989 to 32659002 13 + TSS region transcription start site region 143727
Tssr143728 17 32659009 to 32659020 11 + TSS region transcription start site region 143728
Tssr143729 17 32659021 to 32659041 20 + TSS region transcription start site region 143729
Tssr143730 17 32659044 to 32659058 14 + TSS region transcription start site region 143730
Tssr143731 17 32659066 to 32659079 13 + TSS region transcription start site region 143731
Tssr143732 17 32659080 to 32659091 11 + TSS region transcription start site region 143732
Cpgi8983 17 32676202 to 32676565 363 CpG island CpG island 8983
Tssr143733 17 32685585 to 32685596 11 + TSS region transcription start site region 143733
Tssr143734 17 32685610 to 32685615 5 + TSS region transcription start site region 143734
Cyp4f15 17 32685627 to 32703352 17725 + protein coding gene cytochrome P450, family 4, subfamily f, polypeptide 15
Tssr143735 17 32685639 to 32685643 4 + TSS region transcription start site region 143735
Tssr143736 17 32685655 to 32685677 22 + TSS region transcription start site region 143736
Tssr143737 17 32686093 to 32686106 13 + TSS region transcription start site region 143737
Cpgi8984 17 32702717 to 32703067 350 CpG island CpG island 8984
Gm50046 17 32729528 to 32754198 24670 - lincRNA gene predicted gene, 50046
Tssr143738 17 32730980 to 32730988 8 + TSS region transcription start site region 143738
Gm6452 17 32731010 to 32731806 796 + pseudogene predicted gene 6452
Gm17948 17 32745182 to 32745819 637 + pseudogene predicted gene, 17948
Zfp871 17 32765496 to 32788287 22791 - protein coding gene zinc finger protein 871
Tssr147395 17 32767182 to 32767215 33 - TSS region transcription start site region 147395
Tssr147396 17 32769337 to 32769351 14 - TSS region transcription start site region 147396
Tssr147397 17 32787085 to 32787088 3 - TSS region transcription start site region 147397
Cpgi8985 17 32787701 to 32788445 744 CpG island CpG island 8985
Tssr147398 17 32788238 to 32788260 22 - TSS region transcription start site region 147398
Tssr147399 17 32788264 to 32788283 19 - TSS region transcription start site region 147399
Tssr147400 17 32788284 to 32788297 13 - TSS region transcription start site region 147400
Gm17115 17 32788394 to 32789591 1197 + antisense lncRNA gene predicted gene 17115
Zfp811 17 32795676 to 32809931 14255 - protein coding gene zinc finger protein 811
Gm23294 17 32800567 to 32800730 163 - snRNA gene predicted gene, 23294
Gm25555 17 32804867 to 32804977 110 - rRNA gene predicted gene, 25555
Tssr147401 17 32805698 to 32805710 12 - TSS region transcription start site region 147401
A930009K04Rik 17 32806022 to 32806265 243 unclassified gene RIKEN cDNA A930009K04 gene
Tssr147402 17 32809000 to 32809042 42 - TSS region transcription start site region 147402
Tssr147403 17 32809840 to 32809856 16 - TSS region transcription start site region 147403
Tssr147404 17 32809878 to 32809940 62 - TSS region transcription start site region 147404
Tssr143739 17 32810117 to 32810147 30 + TSS region transcription start site region 143739
Gm26693 17 32810144 to 32821697 11553 + antisense lncRNA gene predicted gene, 26693
Tssr147405 17 32810673 to 32810682 9 - TSS region transcription start site region 147405
Tssr147406 17 32810696 to 32810721 25 - TSS region transcription start site region 147406
Tssr147407 17 32810734 to 32810775 41 - TSS region transcription start site region 147407
Tssr147408 17 32810787 to 32810801 14 - TSS region transcription start site region 147408
Tssr5087 17 32811591 to 32811593 2 + TSS region transcription start site region 5087
Tssr147409 17 32812473 to 32812474 1 - TSS region transcription start site region 147409
Zfp799 17 32815449 to 32830261 14812 - protein coding gene zinc finger protein 799
Cpgi8986 17 32829757 to 32830325 568 CpG island CpG island 8986
Tssr147410 17 32830195 to 32830252 57 - TSS region transcription start site region 147410
Gm18272 17 32841313 to 32841646 333 + pseudogene predicted gene, 18272
Gm7059 17 32852205 to 32853020 815 - pseudogene predicted gene 7059
Gm50050 17 32863662 to 32877942 14280 - lincRNA gene predicted gene, 50050
Gm18273 17 32864649 to 32865897 1248 + pseudogene predicted gene, 18273
Tssr147411 17 32871614 to 32871624 10 - TSS region transcription start site region 147411
Tssr147412 17 32872246 to 32872251 5 - TSS region transcription start site region 147412
Tssr143740 17 32877517 to 32877518 1 + TSS region transcription start site region 143740
Tssr147413 17 32877872 to 32877914 42 - TSS region transcription start site region 147413
Tssr147414 17 32877925 to 32877946 21 - TSS region transcription start site region 147414
Tssr143741 17 32878044 to 32878051 7 + TSS region transcription start site region 143741
Tssr143742 17 32878063 to 32878088 25 + TSS region transcription start site region 143742
Tssr143743 17 32879104 to 32879118 14 + TSS region transcription start site region 143743
Tssr143744 17 32879126 to 32879133 7 + TSS region transcription start site region 143744
Zfp870 17 32879221 to 32891603 12382 - protein coding gene zinc finger protein 870
Gm50051 17 32879221 to 32880304 1083 + antisense lncRNA gene predicted gene, 50051
Cpgi8987 17 32891085 to 32891495 410 CpG island CpG island 8987
Tssr147415 17 32891549 to 32891565 16 - TSS region transcription start site region 147415
Tssr147416 17 32891570 to 32891646 76 - TSS region transcription start site region 147416
Tssr143745 17 32891781 to 32891797 16 + TSS region transcription start site region 143745
D17Mit192 17 32892880 to 32893026 146 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 192
Tssr147417 17 32895442 to 32895454 12 - TSS region transcription start site region 147417
Tssr143746 17 32902429 to 32902440 11 + TSS region transcription start site region 143746
Cyp4f14 17 32905070 to 32917342 12272 - protein coding gene cytochrome P450, family 4, subfamily f, polypeptide 14
Cpgi8988 17 32905437 to 32905806 369 CpG island CpG island 8988
Tssr147418 17 32916996 to 32917003 7 - TSS region transcription start site region 147418
Tssr147419 17 32917017 to 32917022 5 - TSS region transcription start site region 147419
Tssr147420 17 32917031 to 32917042 11 - TSS region transcription start site region 147420
Tssr147421 17 32917048 to 32917118 70 - TSS region transcription start site region 147421
Tssr147422 17 32917193 to 32917197 4 - TSS region transcription start site region 147422
Tssr147423 17 32917220 to 32917227 7 - TSS region transcription start site region 147423
Tssr147424 17 32917320 to 32917342 22 - TSS region transcription start site region 147424
Cyp4f13 17 32924688 to 32947402 22714 - protein coding gene cytochrome P450, family 4, subfamily f, polypeptide 13
Cpgi8989 17 32924718 to 32925146 428 CpG island CpG island 8989
Tssr147425 17 32947350 to 32947368 18 - TSS region transcription start site region 147425
Tssr147426 17 32947372 to 32947387 15 - TSS region transcription start site region 147426
Tssr147427 17 32947389 to 32947395 6 - TSS region transcription start site region 147427