Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:32485639-32885643

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94 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cyp4f39 17 32468462 to 32492479 24017 + protein coding gene cytochrome P450, family 4, subfamily f, polypeptide 39
Tssr143715 17 32492153 to 32492161 8 + TSS region transcription start site region 143715
Tssr143716 17 32492168 to 32492199 31 + TSS region transcription start site region 143716
Cpgi8979 17 32492215 to 32492741 526 CpG island CpG island 8979
D17Mit63 17 32505099 to 32505226 127 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 63
Tssr143717 17 32506419 to 32506440 21 + TSS region transcription start site region 143717
Tssr143718 17 32506446 to 32506473 27 + TSS region transcription start site region 143718
Cyp4f17 17 32506462 to 32528894 22432 + protein coding gene cytochrome P450, family 4, subfamily f, polypeptide 17
Tssr143719 17 32506474 to 32506501 27 + TSS region transcription start site region 143719
Tssr143720 17 32521731 to 32521735 4 + TSS region transcription start site region 143720
Tssr147392 17 32524045 to 32524057 12 - TSS region transcription start site region 147392
Tssr147393 17 32524061 to 32524086 25 - TSS region transcription start site region 147393
Cpgi8980 17 32528599 to 32528920 321 CpG island CpG island 8980
Tssr143721 17 32536555 to 32536573 18 + TSS region transcription start site region 143721
Cyp4f16 17 32536558 to 32551798 15240 + protein coding gene cytochrome P450, family 4, subfamily f, polypeptide 16
Tssr143722 17 32536576 to 32536615 39 + TSS region transcription start site region 143722
Tssr143723 17 32536616 to 32536630 14 + TSS region transcription start site region 143723
Tssr143724 17 32538350 to 32538371 21 + TSS region transcription start site region 143724
Cpgi8981 17 32551005 to 32551249 244 CpG island CpG island 8981
Gm41570 17 32563614 to 32564268 654 + lncRNA gene predicted gene, 41570
D17Mit230 17 32564900 to 32565022 122 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 230
Gm50036 17 32578546 to 32578732 186 + pseudogene predicted gene, 50036
Gm8497 17 32586504 to 32594207 7703 + pseudogene predicted gene 8497
D17Aus127 17 32599813 to 32599939 126 DNA segment DNA segment, Chr 17, Austin 127
Gm50038 17 32602474 to 32604733 2259 + pseudogene predicted gene, 50038
Cyp4f37 17 32621319 to 32636184 14865 + protein coding gene cytochrome P450, family 4, subfamily f, polypeptide 37
1700082C02Rik 17 32634701 to 32635133 432 unclassified gene RIKEN cDNA 1700082C02 gene
Cpgi8982 17 32634945 to 32635194 249 CpG island CpG island 8982
Tssr147394 17 32635139 to 32635157 18 - TSS region transcription start site region 147394
Cyp4f38-ps 17 32642725 to 32653196 10471 + pseudogene cytochrome P450, family 4, subfamily f, member 38, pseudogene
Tssr143725 17 32658878 to 32658913 35 + TSS region transcription start site region 143725
Cyp4f40 17 32658900 to 32676914 18014 + protein coding gene cytochrome P450, family 4, subfamily f, polypeptide 40
Tssr143726 17 32658966 to 32658977 11 + TSS region transcription start site region 143726
Tssr143727 17 32658989 to 32659002 13 + TSS region transcription start site region 143727
Tssr143728 17 32659009 to 32659020 11 + TSS region transcription start site region 143728
Tssr143729 17 32659021 to 32659041 20 + TSS region transcription start site region 143729
Tssr143730 17 32659044 to 32659058 14 + TSS region transcription start site region 143730
Tssr143731 17 32659066 to 32659079 13 + TSS region transcription start site region 143731
Tssr143732 17 32659080 to 32659091 11 + TSS region transcription start site region 143732
Cpgi8983 17 32676202 to 32676565 363 CpG island CpG island 8983
Tssr143733 17 32685585 to 32685596 11 + TSS region transcription start site region 143733
Tssr143734 17 32685610 to 32685615 5 + TSS region transcription start site region 143734
Cyp4f15 17 32685627 to 32703352 17725 + protein coding gene cytochrome P450, family 4, subfamily f, polypeptide 15
Tssr143735 17 32685639 to 32685643 4 + TSS region transcription start site region 143735
Tssr143736 17 32685655 to 32685677 22 + TSS region transcription start site region 143736
Tssr143737 17 32686093 to 32686106 13 + TSS region transcription start site region 143737
Cpgi8984 17 32702717 to 32703067 350 CpG island CpG island 8984
Gm50046 17 32729528 to 32754198 24670 - lincRNA gene predicted gene, 50046
Tssr143738 17 32730980 to 32730988 8 + TSS region transcription start site region 143738
Gm6452 17 32731010 to 32731806 796 + pseudogene predicted gene 6452
Gm17948 17 32745182 to 32745819 637 + pseudogene predicted gene, 17948
Zfp871 17 32765496 to 32788287 22791 - protein coding gene zinc finger protein 871
Tssr147395 17 32767182 to 32767215 33 - TSS region transcription start site region 147395
Tssr147396 17 32769337 to 32769351 14 - TSS region transcription start site region 147396
Tssr147397 17 32787085 to 32787088 3 - TSS region transcription start site region 147397
Cpgi8985 17 32787701 to 32788445 744 CpG island CpG island 8985
Tssr147398 17 32788238 to 32788260 22 - TSS region transcription start site region 147398
Tssr147399 17 32788264 to 32788283 19 - TSS region transcription start site region 147399
Tssr147400 17 32788284 to 32788297 13 - TSS region transcription start site region 147400
Gm17115 17 32788394 to 32789591 1197 + antisense lncRNA gene predicted gene 17115
Zfp811 17 32795676 to 32809931 14255 - protein coding gene zinc finger protein 811
Gm23294 17 32800567 to 32800730 163 - snRNA gene predicted gene, 23294
Gm25555 17 32804867 to 32804977 110 - rRNA gene predicted gene, 25555
Tssr147401 17 32805698 to 32805710 12 - TSS region transcription start site region 147401
A930009K04Rik 17 32806022 to 32806265 243 unclassified gene RIKEN cDNA A930009K04 gene
Tssr147402 17 32809000 to 32809042 42 - TSS region transcription start site region 147402
Tssr147403 17 32809840 to 32809856 16 - TSS region transcription start site region 147403
Tssr147404 17 32809878 to 32809940 62 - TSS region transcription start site region 147404
Tssr143739 17 32810117 to 32810147 30 + TSS region transcription start site region 143739
Gm26693 17 32810144 to 32821697 11553 + antisense lncRNA gene predicted gene, 26693
Tssr147405 17 32810673 to 32810682 9 - TSS region transcription start site region 147405
Tssr147406 17 32810696 to 32810721 25 - TSS region transcription start site region 147406
Tssr147407 17 32810734 to 32810775 41 - TSS region transcription start site region 147407
Tssr147408 17 32810787 to 32810801 14 - TSS region transcription start site region 147408
Tssr5087 17 32811591 to 32811593 2 + TSS region transcription start site region 5087
Tssr147409 17 32812473 to 32812474 1 - TSS region transcription start site region 147409
Zfp799 17 32815449 to 32830261 14812 - protein coding gene zinc finger protein 799
Cpgi8986 17 32829757 to 32830325 568 CpG island CpG island 8986
Tssr147410 17 32830195 to 32830252 57 - TSS region transcription start site region 147410
Gm18272 17 32841313 to 32841646 333 + pseudogene predicted gene, 18272
Gm7059 17 32852205 to 32853020 815 - pseudogene predicted gene 7059
Gm50050 17 32863662 to 32877942 14280 - lincRNA gene predicted gene, 50050
Gm18273 17 32864649 to 32865897 1248 + pseudogene predicted gene, 18273
Tssr147411 17 32871614 to 32871624 10 - TSS region transcription start site region 147411
Tssr147412 17 32872246 to 32872251 5 - TSS region transcription start site region 147412
Tssr143740 17 32877517 to 32877518 1 + TSS region transcription start site region 143740
Tssr147413 17 32877872 to 32877914 42 - TSS region transcription start site region 147413
Tssr147414 17 32877925 to 32877946 21 - TSS region transcription start site region 147414
Tssr143741 17 32878044 to 32878051 7 + TSS region transcription start site region 143741
Tssr143742 17 32878063 to 32878088 25 + TSS region transcription start site region 143742
Tssr143743 17 32879104 to 32879118 14 + TSS region transcription start site region 143743
Tssr143744 17 32879126 to 32879133 7 + TSS region transcription start site region 143744
Gm50051 17 32879221 to 32880304 1083 + antisense lncRNA gene predicted gene, 50051
Zfp870 17 32879221 to 32891603 12382 - protein coding gene zinc finger protein 870