Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:32344515-32474520

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Akap8l 17 32321425 to 32350581 29156 - protein coding gene A kinase (PRKA) anchor protein 8-like
Cpgi8970 17 32350053 to 32351044 991 CpG island CpG island 8970
Tssr147370 17 32350535 to 32350568 33 - TSS region transcription start site region 147370
Tssr147371 17 32350569 to 32350600 31 - TSS region transcription start site region 147371
Wiz 17 32354055 to 32389401 35346 - protein coding gene widely-interspaced zinc finger motifs
Cpgi8971 17 32363675 to 32364924 1249 CpG island CpG island 8971
Tssr147372 17 32364415 to 32364426 11 - TSS region transcription start site region 147372
Tssr147373 17 32364430 to 32364488 58 - TSS region transcription start site region 147373
Gm26858 17 32369305 to 32378445 9140 + lincRNA gene predicted gene, 26858
Tssr147374 17 32369412 to 32369432 20 - TSS region transcription start site region 147374
Cpgi8972 17 32388701 to 32389621 920 CpG island CpG island 8972
Tssr147375 17 32388998 to 32389047 49 - TSS region transcription start site region 147375
Gm22201 17 32389011 to 32389069 58 + miRNA gene predicted gene, 22201
Tssr147376 17 32389364 to 32389411 47 - TSS region transcription start site region 147376
Rasal3 17 32390659 to 32403583 12924 - protein coding gene RAS protein activator like 3
Tssr147377 17 32391864 to 32391866 2 - TSS region transcription start site region 147377
Cpgi8973 17 32392194 to 32392737 543 CpG island CpG island 8973
Cpgi8974 17 32396162 to 32397030 868 CpG island CpG island 8974
A530088E08Rik 17 32403014 to 32404808 1794 + lncRNA gene RIKEN cDNA A530088E08 gene
Tssr147378 17 32403484 to 32403495 11 - TSS region transcription start site region 147378
Tssr147379 17 32403526 to 32403535 9 - TSS region transcription start site region 147379
Tssr147380 17 32403551 to 32403590 39 - TSS region transcription start site region 147380
Tssr147381 17 32403594 to 32403605 11 - TSS region transcription start site region 147381
Tssr147382 17 32409515 to 32409520 5 - TSS region transcription start site region 147382
Gm41569 17 32410861 to 32412926 2065 + lncRNA gene predicted gene, 41569
Pglyrp2 17 32413100 to 32424167 11067 - protein coding gene peptidoglycan recognition protein 2
Cpgi8975 17 32415729 to 32416202 473 CpG island CpG island 8975
Cpgi8976 17 32416859 to 32417124 265 CpG island CpG island 8976
Tssr147383 17 32418855 to 32418856 1 - TSS region transcription start site region 147383
Tssr147384 17 32420917 to 32420948 31 - TSS region transcription start site region 147384
Tssr147385 17 32420965 to 32420986 21 - TSS region transcription start site region 147385
Tssr147386 17 32420998 to 32421003 5 - TSS region transcription start site region 147386
Tssr147387 17 32424102 to 32424127 25 - TSS region transcription start site region 147387
Tssr147388 17 32424139 to 32424153 14 - TSS region transcription start site region 147388
Tssr147389 17 32424157 to 32424162 5 - TSS region transcription start site region 147389
Tssr147390 17 32424179 to 32424190 11 - TSS region transcription start site region 147390
Tssr147391 17 32425280 to 32425295 15 - TSS region transcription start site region 147391
Cpgi8977 17 32452643 to 32452940 297 CpG island CpG island 8977
Tssr143713 17 32452719 to 32452731 12 + TSS region transcription start site region 143713
Tssr143714 17 32452745 to 32452757 12 + TSS region transcription start site region 143714
Cyp4f39 17 32468462 to 32492479 24017 + protein coding gene cytochrome P450, family 4, subfamily f, polypeptide 39