Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:32271425-32400581

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Brd4 17 32196274 to 32284722 88448 - protein coding gene bromodomain containing 4
Tssr147359 17 32272430 to 32272433 3 - TSS region transcription start site region 147359
Tssr147360 17 32276727 to 32276744 17 - TSS region transcription start site region 147360
Cpgi8968 17 32283663 to 32285065 1402 CpG island CpG island 8968
Tssr147361 17 32284088 to 32284116 28 - TSS region transcription start site region 147361
Tssr147362 17 32284135 to 32284162 27 - TSS region transcription start site region 147362
Tssr143709 17 32284461 to 32284484 23 + TSS region transcription start site region 143709
Tssr147363 17 32284659 to 32284706 47 - TSS region transcription start site region 147363
Tssr147364 17 32284715 to 32284738 23 - TSS region transcription start site region 147364
Tssr143710 17 32284772 to 32284809 37 + TSS region transcription start site region 143710
Gm26549 17 32284789 to 32298689 13900 + bidirectional promoter lncRNA gene predicted gene, 26549
Akap8 17 32303676 to 32321153 17477 - protein coding gene A kinase (PRKA) anchor protein 8
Tssr147365 17 32315759 to 32315776 17 - TSS region transcription start site region 147365
Tssr147366 17 32319012 to 32319013 1 - TSS region transcription start site region 147366
Cpgi8969 17 32320122 to 32321773 1651 CpG island CpG island 8969
Tssr147367 17 32320655 to 32320682 27 - TSS region transcription start site region 147367
Tssr147368 17 32321102 to 32321116 14 - TSS region transcription start site region 147368
Tssr147369 17 32321118 to 32321204 86 - TSS region transcription start site region 147369
Tssr143711 17 32321376 to 32321422 46 + TSS region transcription start site region 143711
Akap8l 17 32321425 to 32350581 29156 - protein coding gene A kinase (PRKA) anchor protein 8-like
A630049H14Rik 17 32325903 to 32328458 2555 unclassified gene RIKEN cDNA A630049H14 gene
Tssr143712 17 32335554 to 32335594 40 + TSS region transcription start site region 143712
Cpgi8970 17 32350053 to 32351044 991 CpG island CpG island 8970
Tssr147370 17 32350535 to 32350568 33 - TSS region transcription start site region 147370
Tssr147371 17 32350569 to 32350600 31 - TSS region transcription start site region 147371
Wiz 17 32354055 to 32389401 35346 - protein coding gene widely-interspaced zinc finger motifs
Cpgi8971 17 32363675 to 32364924 1249 CpG island CpG island 8971
Tssr147372 17 32364415 to 32364426 11 - TSS region transcription start site region 147372
Tssr147373 17 32364430 to 32364488 58 - TSS region transcription start site region 147373
Gm26858 17 32369305 to 32378445 9140 + lincRNA gene predicted gene, 26858
Tssr147374 17 32369412 to 32369432 20 - TSS region transcription start site region 147374
Cpgi8972 17 32388701 to 32389621 920 CpG island CpG island 8972
Tssr147375 17 32388998 to 32389047 49 - TSS region transcription start site region 147375
Gm22201 17 32389011 to 32389069 58 + miRNA gene predicted gene, 22201
Tssr147376 17 32389364 to 32389411 47 - TSS region transcription start site region 147376
Rasal3 17 32390659 to 32403583 12924 - protein coding gene RAS protein activator like 3
Tssr147377 17 32391864 to 32391866 2 - TSS region transcription start site region 147377
Cpgi8973 17 32392194 to 32392737 543 CpG island CpG island 8973
Cpgi8974 17 32396162 to 32397030 868 CpG island CpG island 8974