Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:3193110-3316120

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14 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scaf8 17 3114972 to 3198859 83887 + protein coding gene SR-related CTD-associated factor 8
Gm49797 17 3198110 to 3311120 113010 + lincRNA gene predicted gene, 49797
Tssr142356 17 3199601 to 3199605 4 + TSS region transcription start site region 142356
Tssr142357 17 3210506 to 3210510 4 + TSS region transcription start site region 142357
D17Brg6 17 3225374 to 3225610 236 DNA segment DNA segment, Chr 17, David E. Bergstrom 6
Tssr142358 17 3239846 to 3239850 4 + TSS region transcription start site region 142358
Gm34035 17 3270681 to 3283270 12589 - lincRNA gene predicted gene, 34035
Tssr146282 17 3283165 to 3283178 13 - TSS region transcription start site region 146282
Tssr146283 17 3283186 to 3283197 11 - TSS region transcription start site region 146283
Tssr146284 17 3283244 to 3283267 23 - TSS region transcription start site region 146284
Tssr146285 17 3283276 to 3283284 8 - TSS region transcription start site region 146285
Gm6475 17 3312250 to 3314185 1935 - pseudogene predicted gene 6475
Cpgi8545 17 3313922 to 3314826 904 CpG island CpG island 8545
Tssr146286 17 3314177 to 3314221 44 - TSS region transcription start site region 146286