Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 17:31562623-31687233

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63 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hst6 17 29491045 to 31681724 2190679 heritable phenotypic marker hybrid sterility 6
Del(17Abcg1-Cbs)2Yah 17 31057698 to 31637199 579501 chromosomal deletion deletion, Chr 17, Yann Herault 2
Dp(17Abcg1-Cbs)1Yah 17 31057698 to 31637199 579501 chromosomal duplication duplication, Chr 17, Yann Herault 1
Gm50455 17 31562782 to 31565692 2910 - lncRNA gene predicted gene, 50455
Gm50108 17 31563170 to 31563732 562 + unclassified gene predicted gene, 50108
Cpgi8947 17 31563972 to 31565976 2004 CpG island CpG island 8947
Pknox1 17 31564734 to 31607693 42959 + protein coding gene Pbx/knotted 1 homeobox
Tssr143672 17 31564749 to 31564854 105 + TSS region transcription start site region 143672
Tssr143673 17 31564855 to 31564873 18 + TSS region transcription start site region 143673
Tssr143674 17 31564948 to 31564963 15 + TSS region transcription start site region 143674
Gm24970 17 31564962 to 31565043 81 - miRNA gene predicted gene, 24970
Tssr147293 17 31565681 to 31565691 10 - TSS region transcription start site region 147293
Gm50107 17 31567163 to 31568854 1691 + lncRNA gene predicted gene, 50107
Tssr143675 17 31585881 to 31585912 31 + TSS region transcription start site region 143675
Tssr143676 17 31586370 to 31586374 4 + TSS region transcription start site region 143676
Tssr143677 17 31591719 to 31591759 40 + TSS region transcription start site region 143677
Tssr143678 17 31594822 to 31594839 17 + TSS region transcription start site region 143678
Cbs 17 31612623 to 31637233 24610 - protein coding gene cystathionine beta-synthase
Tssr147294 17 31633079 to 31633101 22 - TSS region transcription start site region 147294
Tssr147295 17 31633103 to 31633152 49 - TSS region transcription start site region 147295
Tssr147296 17 31633154 to 31633176 22 - TSS region transcription start site region 147296
Tssr143679 17 31636028 to 31636030 2 + TSS region transcription start site region 143679
Cpgi8948 17 31636272 to 31637744 1472 CpG island CpG island 8948
Tssr147297 17 31636505 to 31636526 21 - TSS region transcription start site region 147297
Tssr147298 17 31636583 to 31636594 11 - TSS region transcription start site region 147298
Tssr147299 17 31636603 to 31636624 21 - TSS region transcription start site region 147299
Tssr147300 17 31636631 to 31636652 21 - TSS region transcription start site region 147300
Tssr147301 17 31637135 to 31637185 50 - TSS region transcription start site region 147301
Rps2-ps8 17 31643898 to 31644779 881 - pseudogene ribosomal protein S2, pseudogene 8
Tssr147302 17 31644799 to 31644809 10 - TSS region transcription start site region 147302
U2af1 17 31647081 to 31658892 11811 - protein coding gene U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
Tssr147303 17 31654932 to 31654935 3 - TSS region transcription start site region 147303
Cpgi8949 17 31658048 to 31659370 1322 CpG island CpG island 8949
Tssr147304 17 31658729 to 31658766 37 - TSS region transcription start site region 147304
Mnctp1 17 31673397 to 31673397 0 QTL percent monocytes 1
Gm50222 17 31676789 to 31684374 7585 - lncRNA gene predicted gene, 50222
Tssr143680 17 31677924 to 31677939 15 + TSS region transcription start site region 143680
Cryaa 17 31677931 to 31681730 3799 + protein coding gene crystallin, alpha A
Tssr147305 17 31678109 to 31678124 15 - TSS region transcription start site region 147305
Tssr147306 17 31678131 to 31678166 35 - TSS region transcription start site region 147306
Tssr147307 17 31678181 to 31678194 13 - TSS region transcription start site region 147307
Tssr147308 17 31678498 to 31678540 42 - TSS region transcription start site region 147308
D17Rua3 17 31678515 to 31679582 1067 DNA segment DNA segment, Chr 17, Rutgers University 3
Tssr143681 17 31678924 to 31678934 10 + TSS region transcription start site region 143681
Tssr143682 17 31679569 to 31679581 12 + TSS region transcription start site region 143682
Tssr143683 17 31679639 to 31679655 16 + TSS region transcription start site region 143683
Tssr143684 17 31681002 to 31681020 18 + TSS region transcription start site region 143684
Tssr143685 17 31681042 to 31681068 26 + TSS region transcription start site region 143685
Tssr143686 17 31681143 to 31681152 9 + TSS region transcription start site region 143686
Tssr143687 17 31681161 to 31681174 13 + TSS region transcription start site region 143687
Tssr5085 17 31681261 to 31681286 25 + TSS region transcription start site region 5085
Tssr147309 17 31681270 to 31681294 24 - TSS region transcription start site region 147309
Tssr143688 17 31681295 to 31681299 4 + TSS region transcription start site region 143688
Tssr143689 17 31681318 to 31681331 13 + TSS region transcription start site region 143689
Tssr5086 17 31681375 to 31681391 16 + TSS region transcription start site region 5086
Tssr143690 17 31681504 to 31681512 8 + TSS region transcription start site region 143690
Tssr147310 17 31681530 to 31681537 7 - TSS region transcription start site region 147310
Tssr147311 17 31681595 to 31681603 8 - TSS region transcription start site region 147311
Tssr143691 17 31681606 to 31681615 9 + TSS region transcription start site region 143691
Tssr143692 17 31681660 to 31681677 17 + TSS region transcription start site region 143692
Tssr143693 17 31681684 to 31681699 15 + TSS region transcription start site region 143693
Tssr147312 17 31681717 to 31681724 7 - TSS region transcription start site region 147312
Tssr147313 17 31684307 to 31684355 48 - TSS region transcription start site region 147313