Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:30941936-31061942

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi8939 17 30945711 to 30946118 407 CpG island CpG island 8939
Gm41562 17 30945785 to 30951722 5937 + lncRNA gene predicted gene, 41562
Umodl1 17 30954679 to 31010708 56029 + protein coding gene uromodulin-like 1
Gm24026 17 30967197 to 30967294 97 + miRNA gene predicted gene, 24026
Tssr143633 17 30984078 to 30984089 11 + TSS region transcription start site region 143633
Tssr143634 17 30984090 to 30984100 10 + TSS region transcription start site region 143634
Tssr143635 17 31001936 to 31001942 6 + TSS region transcription start site region 143635
Tssr147268 17 31039700 to 31039746 46 - TSS region transcription start site region 147268
Tssr143636 17 31039860 to 31039865 5 + TSS region transcription start site region 143636
Cpgi8940 17 31057265 to 31058361 1096 CpG island CpG island 8940
Tssr143637 17 31057686 to 31057699 13 + TSS region transcription start site region 143637
Del(17Abcg1-Cbs)2Yah 17 31057698 to 31637199 579501 chromosomal deletion deletion, Chr 17, Yann Herault 2
Del(17Abcg1-Rrp1b)5Yey 17 31057698 to 32062865 1005167 chromosomal deletion deletion, Chr 17, Y Eugene Yu 5
Dp(17Abcg1-Cbs)1Yah 17 31057698 to 31637199 579501 chromosomal duplication duplication, Chr 17, Yann Herault 1
Dp(17Abcg1-Rrp1b)3Yey 17 31057698 to 32062865 1005167 chromosomal duplication duplication, Chr 17, Y Eugene Yu 3
Abcg1 17 31057698 to 31115777 58079 + protein coding gene ATP binding cassette subfamily G member 1
Tssr143638 17 31057704 to 31057713 9 + TSS region transcription start site region 143638
Tssr143639 17 31057719 to 31057734 15 + TSS region transcription start site region 143639
Tssr143640 17 31057740 to 31057749 9 + TSS region transcription start site region 143640
Tssr143641 17 31057768 to 31057778 10 + TSS region transcription start site region 143641
Gm25447 17 31059604 to 31059731 127 + rRNA gene predicted gene, 25447