Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:3084972-3228859

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700024P12Rik 17 3083923 to 3084985 1062 unclassified gene RIKEN cDNA 1700024P12 gene
Gm41522 17 3091395 to 3096952 5557 - pseudogene predicted gene, 41522
Gm5679 17 3097018 to 3098165 1147 + pseudogene predicted gene 5679
Gm4829 17 3101143 to 3101736 593 - pseudogene predicted gene 4829
Gm21926 17 3103784 to 3104442 658 - pseudogene predicted gene, 21926
Cpgi8544 17 3114067 to 3115888 1821 CpG island CpG island 8544
Tssr146274 17 3114512 to 3114534 22 - TSS region transcription start site region 146274
Tssr146275 17 3114552 to 3114563 11 - TSS region transcription start site region 146275
Tssr146276 17 3114762 to 3114828 66 - TSS region transcription start site region 146276
Tssr146277 17 3114835 to 3114892 57 - TSS region transcription start site region 146277
Tssr142347 17 3114930 to 3114939 9 + TSS region transcription start site region 142347
Tssr142348 17 3114957 to 3114982 25 + TSS region transcription start site region 142348
Scaf8 17 3114972 to 3198859 83887 + protein coding gene SR-related CTD-associated factor 8
Tssr142349 17 3114988 to 3115002 14 + TSS region transcription start site region 142349
Tssr142350 17 3115004 to 3115013 9 + TSS region transcription start site region 142350
Tssr142351 17 3115120 to 3115134 14 + TSS region transcription start site region 142351
Tssr142352 17 3115210 to 3115268 58 + TSS region transcription start site region 142352
Tssr142353 17 3115279 to 3115291 12 + TSS region transcription start site region 142353
Tssr146278 17 3115707 to 3115720 13 - TSS region transcription start site region 146278
Tssr146279 17 3115748 to 3115768 20 - TSS region transcription start site region 146279
Gm49798 17 3124555 to 3124801 246 - pseudogene predicted gene, 49798
Gm46578 17 3130158 to 3130512 354 - pseudogene predicted gene, 46578
D17Brg3 17 3132310 to 3132498 188 DNA segment DNA segment, Chr 17, David E. Bergstrom 3
Tssr4980 17 3155805 to 3155810 5 + TSS region transcription start site region 4980
Gm6242 17 3155856 to 3156365 509 + pseudogene predicted gene 6242
Tssr146280 17 3156355 to 3156366 11 - TSS region transcription start site region 146280
Tssr146281 17 3157874 to 3157889 15 - TSS region transcription start site region 146281
Tssr142354 17 3167022 to 3167027 5 + TSS region transcription start site region 142354
Tssr142355 17 3188637 to 3188651 14 + TSS region transcription start site region 142355
Gm49797 17 3198110 to 3311120 113010 + lincRNA gene predicted gene, 49797
Tssr142356 17 3199601 to 3199605 4 + TSS region transcription start site region 142356
Tssr142357 17 3210506 to 3210510 4 + TSS region transcription start site region 142357
D17Brg6 17 3225374 to 3225610 236 DNA segment DNA segment, Chr 17, David E. Bergstrom 6