Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:30653427-31054232

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dnah8 17 30626936 to 30875762 248826 + protein coding gene dynein, axonemal, heavy chain 8
Tssr143623 17 30678568 to 30678573 5 + TSS region transcription start site region 143623
Tssr143624 17 30684821 to 30684826 5 + TSS region transcription start site region 143624
D17Mit229 17 30719705 to 30719820 115 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 229
Tssr143625 17 30747722 to 30747725 3 + TSS region transcription start site region 143625
D17Mit199 17 30763470 to 30763594 124 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 199
Mrdq1 17 30768929 to 47728778 16959849 QTL modifier of retinal degeneration QTL 1
Gm24661 17 30782026 to 30782129 103 - snRNA gene predicted gene, 24661
Tssr5065 17 30794198 to 30794202 4 + TSS region transcription start site region 5065
Tssr143626 17 30800667 to 30800672 5 + TSS region transcription start site region 143626
Tssr143627 17 30845709 to 30845710 1 + TSS region transcription start site region 143627
Gm41561 17 30848427 to 30859232 10805 - lncRNA gene predicted gene, 41561
Tssr143628 17 30871284 to 30871310 26 + TSS region transcription start site region 143628
Gm9937 17 30871403 to 30875318 3915 unclassified gene predicted gene 9937
Cpgi8937 17 30874493 to 30874712 219 CpG island CpG island 8937
Tssr147267 17 30875031 to 30875036 5 - TSS region transcription start site region 147267
Cpgi8938 17 30901459 to 30902297 838 CpG island CpG island 8938
Tssr143629 17 30901558 to 30901568 10 + TSS region transcription start site region 143629
Tssr143630 17 30901811 to 30901826 15 + TSS region transcription start site region 143630
Tssr5066 17 30901843 to 30901846 3 + TSS region transcription start site region 5066
Glp1r 17 30901867 to 30936510 34643 + protein coding gene glucagon-like peptide 1 receptor
Tir7 17 30904398 to 30904522 124 QTL trypanosome infection response 7
D17Mit81 17 30904398 to 30904522 124 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 81
D17Dcr3 17 30904405 to 30904521 116 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 3
Tssr143631 17 30919583 to 30919615 32 + TSS region transcription start site region 143631
1810057I12Rik 17 30937001 to 30937530 529 unclassified gene RIKEN cDNA 1810057I12 gene
Tssr143632 17 30938554 to 30938557 3 + TSS region transcription start site region 143632
2900001G08Rik 17 30938869 to 30940705 1836 unclassified gene RIKEN cDNA 2900001G08 gene
Cpgi8939 17 30945711 to 30946118 407 CpG island CpG island 8939
Gm41562 17 30945785 to 30951722 5937 + lncRNA gene predicted gene, 41562
Umodl1 17 30954679 to 31010708 56029 + protein coding gene uromodulin-like 1
Gm24026 17 30967197 to 30967294 97 + miRNA gene predicted gene, 24026
Tssr143633 17 30984078 to 30984089 11 + TSS region transcription start site region 143633
Tssr143634 17 30984090 to 30984100 10 + TSS region transcription start site region 143634
Tssr143635 17 31001936 to 31001942 6 + TSS region transcription start site region 143635
Tssr147268 17 31039700 to 31039746 46 - TSS region transcription start site region 147268
Tssr143636 17 31039860 to 31039865 5 + TSS region transcription start site region 143636