Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:30199368-30579370

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cfq12 17 26609807 to 30445981 3836174 QTL conditioned fear QTL 12
Zfand3 17 30005039 to 30210020 204981 + protein coding gene zinc finger, AN1-type domain 3
D17Ertd277e 17 30199218 to 30199430 212 DNA segment DNA segment, Chr 17, ERATO Doi 277, expressed
Btbd9 17 30215524 to 30576287 360763 - protein coding gene BTB (POZ) domain containing 9
Tssr147245 17 30229161 to 30229170 9 - TSS region transcription start site region 147245
Gm25049 17 30311079 to 30311151 72 + snRNA gene predicted gene, 25049
D17Mit60 17 30356122 to 30356232 110 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 60
Tssr147246 17 30389368 to 30389370 2 - TSS region transcription start site region 147246
Gm6402 17 30394825 to 30396180 1355 - pseudogene predicted pseudogene 6402
Tssr147247 17 30396055 to 30396060 5 - TSS region transcription start site region 147247
Tssr147248 17 30398258 to 30398263 5 - TSS region transcription start site region 147248
Tssr5064 17 30414717 to 30414729 12 - TSS region transcription start site region 5064
Tssr147249 17 30415844 to 30415848 4 - TSS region transcription start site region 147249
Tssr147250 17 30424372 to 30424375 3 - TSS region transcription start site region 147250
Gm9874 17 30484661 to 30486124 1463 + unclassified gene predicted gene 9874
Tssr147251 17 30538102 to 30538107 5 - TSS region transcription start site region 147251
Tssr147252 17 30563815 to 30563819 4 - TSS region transcription start site region 147252
Tssr147253 17 30571131 to 30571154 23 - TSS region transcription start site region 147253
Tssr147254 17 30571808 to 30571855 47 - TSS region transcription start site region 147254
Cpgi8935 17 30575541 to 30576905 1364 CpG island CpG island 8935
Tssr147255 17 30576163 to 30576240 77 - TSS region transcription start site region 147255
Tssr147256 17 30576241 to 30576312 71 - TSS region transcription start site region 147256
0710001D07Rik 17 30576299 to 30577431 1132 unclassified gene RIKEN cDNA 0710001D07 gene
Tssr143616 17 30576322 to 30576366 44 + TSS region transcription start site region 143616
Tssr147257 17 30576401 to 30576423 22 - TSS region transcription start site region 147257
Tssr147258 17 30576441 to 30576506 65 - TSS region transcription start site region 147258
Tssr143617 17 30576531 to 30576559 28 + TSS region transcription start site region 143617
Tssr143618 17 30576565 to 30576603 38 + TSS region transcription start site region 143618