Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:30029368-30749370

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cfq12 17 26609807 to 30445981 3836174 QTL conditioned fear QTL 12
Zfand3 17 30005039 to 30210020 204981 + protein coding gene zinc finger, AN1-type domain 3
Tssr143609 17 30060342 to 30060359 17 + TSS region transcription start site region 143609
Tssr143610 17 30077506 to 30077516 10 + TSS region transcription start site region 143610
D17Jcs18 17 30080769 to 30081015 246 DNA segment DNA segment, Chr 17, John C. Schimenti 18
Tssr143611 17 30088785 to 30088795 10 + TSS region transcription start site region 143611
Tssr143612 17 30135173 to 30135193 20 + TSS region transcription start site region 143612
Tssr143613 17 30135194 to 30135210 16 + TSS region transcription start site region 143613
Tssr147244 17 30135365 to 30135396 31 - TSS region transcription start site region 147244
Tssr143614 17 30155961 to 30155968 7 + TSS region transcription start site region 143614
C130068B02Rik 17 30163331 to 30164791 1460 unclassified gene RIKEN cDNA C130068B02 gene
Tssr143615 17 30169838 to 30169843 5 + TSS region transcription start site region 143615
Tuba-rs1 17 30177433 to 30178789 1356 + pseudogene tubulin alpha, related sequence 1
D17Ertd277e 17 30199218 to 30199430 212 DNA segment DNA segment, Chr 17, ERATO Doi 277, expressed
Btbd9 17 30215524 to 30576287 360763 - protein coding gene BTB (POZ) domain containing 9
Tssr147245 17 30229161 to 30229170 9 - TSS region transcription start site region 147245
Gm25049 17 30311079 to 30311151 72 + snRNA gene predicted gene, 25049
D17Mit60 17 30356122 to 30356232 110 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 60
Tssr147246 17 30389368 to 30389370 2 - TSS region transcription start site region 147246
Gm6402 17 30394825 to 30396180 1355 - pseudogene predicted pseudogene 6402
Tssr147247 17 30396055 to 30396060 5 - TSS region transcription start site region 147247
Tssr147248 17 30398258 to 30398263 5 - TSS region transcription start site region 147248
Tssr5064 17 30414717 to 30414729 12 - TSS region transcription start site region 5064
Tssr147249 17 30415844 to 30415848 4 - TSS region transcription start site region 147249
Tssr147250 17 30424372 to 30424375 3 - TSS region transcription start site region 147250
Gm9874 17 30484661 to 30486124 1463 + unclassified gene predicted gene 9874
Tssr147251 17 30538102 to 30538107 5 - TSS region transcription start site region 147251
Tssr147252 17 30563815 to 30563819 4 - TSS region transcription start site region 147252
Tssr147253 17 30571131 to 30571154 23 - TSS region transcription start site region 147253
Tssr147254 17 30571808 to 30571855 47 - TSS region transcription start site region 147254
Cpgi8935 17 30575541 to 30576905 1364 CpG island CpG island 8935
Tssr147255 17 30576163 to 30576240 77 - TSS region transcription start site region 147255
Tssr147256 17 30576241 to 30576312 71 - TSS region transcription start site region 147256
0710001D07Rik 17 30576299 to 30577431 1132 unclassified gene RIKEN cDNA 0710001D07 gene
Tssr143616 17 30576322 to 30576366 44 + TSS region transcription start site region 143616
Tssr147257 17 30576401 to 30576423 22 - TSS region transcription start site region 147257
Tssr147258 17 30576441 to 30576506 65 - TSS region transcription start site region 147258
Tssr143617 17 30576531 to 30576559 28 + TSS region transcription start site region 143617
Tssr143618 17 30576565 to 30576603 38 + TSS region transcription start site region 143618
Glo1 17 30592866 to 30612659 19793 - protein coding gene glyoxalase 1
Tssr147259 17 30593534 to 30593539 5 - TSS region transcription start site region 147259
Tssr147260 17 30597874 to 30597885 11 - TSS region transcription start site region 147260
Tssr147261 17 30597887 to 30597901 14 - TSS region transcription start site region 147261
Tssr147262 17 30602302 to 30602343 41 - TSS region transcription start site region 147262
Gm8373 17 30602591 to 30603710 1119 + pseudogene predicted gene 8373
Tssr143619 17 30603194 to 30603204 10 + TSS region transcription start site region 143619
Tssr147263 17 30604171 to 30604182 11 - TSS region transcription start site region 147263
Tssr147264 17 30606627 to 30606655 28 - TSS region transcription start site region 147264
Cpgi8936 17 30612178 to 30612789 611 CpG island CpG island 8936
Tssr147265 17 30612558 to 30612577 19 - TSS region transcription start site region 147265
Tssr147266 17 30612613 to 30612663 50 - TSS region transcription start site region 147266
1700097N02Rik 17 30622441 to 30626905 4464 - antisense lncRNA gene RIKEN cDNA 1700097N02 gene
Dnah8 17 30626936 to 30875762 248826 + protein coding gene dynein, axonemal, heavy chain 8
Tssr143620 17 30635503 to 30635548 45 + TSS region transcription start site region 143620
D17Mit61 17 30636084 to 30636245 161 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 61
Tssr143621 17 30651648 to 30651670 22 + TSS region transcription start site region 143621
Tssr143622 17 30651679 to 30651701 22 + TSS region transcription start site region 143622
Tssr143623 17 30678568 to 30678573 5 + TSS region transcription start site region 143623
Tssr143624 17 30684821 to 30684826 5 + TSS region transcription start site region 143624
D17Mit229 17 30719705 to 30719820 115 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 229
Tssr143625 17 30747722 to 30747725 3 + TSS region transcription start site region 143625