Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:29980039-30235823

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm50017 17 29979320 to 29982233 2913 + lincRNA gene predicted gene, 50017
Tssr147241 17 29981727 to 29981748 21 - TSS region transcription start site region 147241
Gm50018 17 29983680 to 29983988 308 - pseudogene predicted gene, 50018
Gm22327 17 29984034 to 29984141 107 - snoRNA gene predicted gene, 22327
Gm50019 17 29997956 to 30004691 6735 - bidirectional promoter lncRNA gene predicted gene, 50019
Cpgi8934 17 30004100 to 30005783 1683 CpG island CpG island 8934
Tssr143600 17 30004356 to 30004393 37 + TSS region transcription start site region 143600
Tssr143601 17 30004480 to 30004519 39 + TSS region transcription start site region 143601
Tssr147242 17 30004620 to 30004640 20 - TSS region transcription start site region 147242
Tssr143602 17 30004778 to 30004846 68 + TSS region transcription start site region 143602
Tssr143603 17 30004853 to 30004876 23 + TSS region transcription start site region 143603
Tssr143604 17 30005029 to 30005098 69 + TSS region transcription start site region 143604
Zfand3 17 30005039 to 30210020 204981 + protein coding gene zinc finger, AN1-type domain 3
Tssr147243 17 30005635 to 30005640 5 - TSS region transcription start site region 147243
Tssr143605 17 30005779 to 30005793 14 + TSS region transcription start site region 143605
Tssr143606 17 30005887 to 30005905 18 + TSS region transcription start site region 143606
Tssr143607 17 30007655 to 30007664 9 + TSS region transcription start site region 143607
Tssr143608 17 30011168 to 30011176 8 + TSS region transcription start site region 143608
D17Ertd165e 17 30024657 to 30024897 240 DNA segment DNA segment, Chr 17, ERATO Doi 165, expressed
Tssr143609 17 30060342 to 30060359 17 + TSS region transcription start site region 143609
Tssr143610 17 30077506 to 30077516 10 + TSS region transcription start site region 143610
D17Jcs18 17 30080769 to 30081015 246 DNA segment DNA segment, Chr 17, John C. Schimenti 18
Tssr143611 17 30088785 to 30088795 10 + TSS region transcription start site region 143611
Tssr143612 17 30135173 to 30135193 20 + TSS region transcription start site region 143612
Tssr143613 17 30135194 to 30135210 16 + TSS region transcription start site region 143613
Tssr147244 17 30135365 to 30135396 31 - TSS region transcription start site region 147244
Tssr143614 17 30155961 to 30155968 7 + TSS region transcription start site region 143614
C130068B02Rik 17 30163331 to 30164791 1460 unclassified gene RIKEN cDNA C130068B02 gene
Tssr143615 17 30169838 to 30169843 5 + TSS region transcription start site region 143615
Tuba-rs1 17 30177433 to 30178789 1356 + pseudogene tubulin alpha, related sequence 1
D17Ertd277e 17 30199218 to 30199430 212 DNA segment DNA segment, Chr 17, ERATO Doi 277, expressed
Btbd9 17 30215524 to 30576287 360763 - protein coding gene BTB (POZ) domain containing 9
Tssr147245 17 30229161 to 30229170 9 - TSS region transcription start site region 147245