Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:2978159-3129111

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49792 17 3042024 to 3042303 279 + pseudogene predicted gene, 49792
Gm10232 17 3044017 to 3044733 716 - pseudogene predicted pseudogene 10232
Gm16569 17 3053159 to 3054111 952 + pseudogene predicted gene 16569
Gm5479 17 3056583 to 3056994 411 + pseudogene predicted gene 5479
Gm25909 17 3057799 to 3057919 120 - snoRNA gene predicted gene, 25909
Pisd-ps2 17 3076578 to 3084183 7605 - pseudogene phosphatidylserine decarboxylase, pseudogene 2
Cpgi8542 17 3082757 to 3083021 264 CpG island CpG island 8542
Tssr146273 17 3082849 to 3082863 14 - TSS region transcription start site region 146273
1700024P12Rik 17 3083923 to 3084985 1062 unclassified gene RIKEN cDNA 1700024P12 gene
Cpgi8543 17 3083943 to 3084932 989 CpG island CpG island 8543
Tssr142346 17 3084222 to 3084251 29 + TSS region transcription start site region 142346
Gm41522 17 3091395 to 3096952 5557 - pseudogene predicted gene, 41522
Gm5679 17 3097018 to 3098165 1147 + pseudogene predicted gene 5679
Gm4829 17 3101143 to 3101736 593 - pseudogene predicted gene 4829
Gm21926 17 3103784 to 3104442 658 - pseudogene predicted gene, 21926
Cpgi8544 17 3114067 to 3115888 1821 CpG island CpG island 8544
Tssr146274 17 3114512 to 3114534 22 - TSS region transcription start site region 146274
Tssr146275 17 3114552 to 3114563 11 - TSS region transcription start site region 146275
Tssr146276 17 3114762 to 3114828 66 - TSS region transcription start site region 146276
Tssr146277 17 3114835 to 3114892 57 - TSS region transcription start site region 146277
Tssr142347 17 3114930 to 3114939 9 + TSS region transcription start site region 142347
Tssr142348 17 3114957 to 3114982 25 + TSS region transcription start site region 142348
Scaf8 17 3114972 to 3198859 83887 + protein coding gene SR-related CTD-associated factor 8
Tssr142349 17 3114988 to 3115002 14 + TSS region transcription start site region 142349
Tssr142350 17 3115004 to 3115013 9 + TSS region transcription start site region 142350
Tssr142351 17 3115120 to 3115134 14 + TSS region transcription start site region 142351
Tssr142352 17 3115210 to 3115268 58 + TSS region transcription start site region 142352
Tssr142353 17 3115279 to 3115291 12 + TSS region transcription start site region 142353
Tssr146278 17 3115707 to 3115720 13 - TSS region transcription start site region 146278
Tssr146279 17 3115748 to 3115768 20 - TSS region transcription start site region 146279
Gm49798 17 3124555 to 3124801 246 - pseudogene predicted gene, 49798