Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:29636249-29746250

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm28052 17 29549799 to 29682012 132213 + unclassified non-coding RNA gene predicted gene, 28052
Rnf8 17 29614789 to 29641664 26875 + protein coding gene ring finger protein 8
Gm28043 17 29614876 to 29703359 88483 + protein coding gene predicted gene, 28043
Tssr143585 17 29637005 to 29637047 42 + TSS region transcription start site region 143585
Gm20161 17 29652228 to 29658336 6108 - lncRNA gene predicted gene, 20161
Tssr147233 17 29658304 to 29658334 30 - TSS region transcription start site region 147233
Tssr147234 17 29658337 to 29658352 15 - TSS region transcription start site region 147234
Cpgi8924 17 29660400 to 29661312 912 CpG island CpG island 8924
Cmtr1 17 29660595 to 29705979 45384 + protein coding gene cap methyltransferase 1
Tssr143586 17 29660614 to 29660706 92 + TSS region transcription start site region 143586
Tssr143587 17 29660710 to 29660721 11 + TSS region transcription start site region 143587
Tssr143588 17 29662246 to 29662250 4 + TSS region transcription start site region 143588
Tssr143589 17 29679247 to 29679270 23 + TSS region transcription start site region 143589
Tssr143590 17 29680527 to 29680538 11 + TSS region transcription start site region 143590
Tssr143591 17 29681169 to 29681181 12 + TSS region transcription start site region 143591
Tssr147235 17 29691249 to 29691250 1 - TSS region transcription start site region 147235
Tssr143592 17 29691258 to 29691279 21 + TSS region transcription start site region 143592
Ccdc167 17 29695977 to 29717017 21040 - protein coding gene coiled-coil domain containing 167
Cpgi8925 17 29716698 to 29717206 508 CpG island CpG island 8925
Tssr147236 17 29716969 to 29717028 59 - TSS region transcription start site region 147236
Tssr143593 17 29717115 to 29717147 32 + TSS region transcription start site region 143593
1810014P07Rik 17 29718784 to 29719152 368 unclassified gene RIKEN cDNA 1810014P07 gene