Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 17:29544799-29687012

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32 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm17657 17 29518642 to 29549638 30996 - protein coding gene predicted gene, 17657
Tmem217 17 29526007 to 29552385 26378 - protein coding gene transmembrane protein 217
Tssr147230 17 29549588 to 29549598 10 - TSS region transcription start site region 147230
Tssr147231 17 29549631 to 29549643 12 - TSS region transcription start site region 147231
Cpgi8922 17 29549639 to 29550263 624 CpG island CpG island 8922
Tssr143580 17 29549783 to 29549798 15 + TSS region transcription start site region 143580
Tbc1d22b 17 29549785 to 29606898 57113 + protein coding gene TBC1 domain family, member 22B
Gm28052 17 29549799 to 29682012 132213 + lncRNA gene predicted gene, 28052
Tbc1d22bos 17 29578816 to 29596305 17489 - antisense lncRNA gene TBC1 domain family, member 22B, opposite strand
Tssr147232 17 29579429 to 29579451 22 - TSS region transcription start site region 147232
Mir7667 17 29595538 to 29595600 62 + miRNA gene microRNA 7667
2010106G04Rik 17 29614460 to 29614770 310 - lncRNA gene RIKEN cDNA 2010106G04 gene
Cpgi8923 17 29614519 to 29615621 1102 CpG island CpG island 8923
Tssr143581 17 29614786 to 29614797 11 + TSS region transcription start site region 143581
Rnf8 17 29614789 to 29641664 26875 + protein coding gene ring finger protein 8
Tssr143582 17 29614800 to 29614844 44 + TSS region transcription start site region 143582
Tssr143583 17 29614848 to 29614928 80 + TSS region transcription start site region 143583
Gm28043 17 29614876 to 29703359 88483 + protein coding gene predicted gene, 28043
Tssr143584 17 29614947 to 29614958 11 + TSS region transcription start site region 143584
4930563A19Rik 17 29615283 to 29615548 265 + lncRNA gene RIKEN cDNA 4930563A19 gene
Tssr143585 17 29637005 to 29637047 42 + TSS region transcription start site region 143585
Gm20161 17 29652231 to 29658329 6098 - lncRNA gene predicted gene, 20161
Tssr147233 17 29658304 to 29658334 30 - TSS region transcription start site region 147233
Tssr147234 17 29658337 to 29658352 15 - TSS region transcription start site region 147234
Cpgi8924 17 29660400 to 29661312 912 CpG island CpG island 8924
Cmtr1 17 29660595 to 29705979 45384 + protein coding gene cap methyltransferase 1
Tssr143586 17 29660614 to 29660706 92 + TSS region transcription start site region 143586
Tssr143587 17 29660710 to 29660721 11 + TSS region transcription start site region 143587
Tssr143588 17 29662246 to 29662250 4 + TSS region transcription start site region 143588
Tssr143589 17 29679247 to 29679270 23 + TSS region transcription start site region 143589
Tssr143590 17 29680527 to 29680538 11 + TSS region transcription start site region 143590
Tssr143591 17 29681169 to 29681181 12 + TSS region transcription start site region 143591