Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:28744315-28803704

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Opfaq5 17 25731951 to 28773124 3041173 QTL open field activity QTL 5
Mapk14 17 28691342 to 28748405 57063 + protein coding gene mitogen-activated protein kinase 14
Tssr143461 17 28746014 to 28746030 16 + TSS region transcription start site region 143461
Tssr143462 17 28747432 to 28747457 25 + TSS region transcription start site region 143462
Tssr143463 17 28747601 to 28747613 12 + TSS region transcription start site region 143463
Cpgi8897 17 28769053 to 28770306 1253 CpG island CpG island 8897
Mapk13 17 28769315 to 28778704 9389 + protein coding gene mitogen-activated protein kinase 13
Tssr143464 17 28769327 to 28769376 49 + TSS region transcription start site region 143464
Tssr143465 17 28769382 to 28769385 3 + TSS region transcription start site region 143465
Tssr143466 17 28769741 to 28769783 42 + TSS region transcription start site region 143466
Tssr147152 17 28770232 to 28770255 23 - TSS region transcription start site region 147152
Tssr147153 17 28770270 to 28770280 10 - TSS region transcription start site region 147153
Tssr143467 17 28786060 to 28786064 4 + TSS region transcription start site region 143467
Gm49864 17 28799494 to 28801623 2129 - bidirectional promoter lncRNA gene predicted gene, 49864
Cpgi8898 17 28800449 to 28802108 1659 CpG island CpG island 8898
Tssr143468 17 28800753 to 28800785 32 + TSS region transcription start site region 143468
Brpf3 17 28800763 to 28838789 38026 + protein coding gene bromodomain and PHD finger containing, 3
Tssr143469 17 28801091 to 28801145 54 + TSS region transcription start site region 143469
Tssr143470 17 28801150 to 28801173 23 + TSS region transcription start site region 143470
Tssr147154 17 28801586 to 28801600 14 - TSS region transcription start site region 147154
Tssr147155 17 28801603 to 28801621 18 - TSS region transcription start site region 147155
Tssr143471 17 28801771 to 28801822 51 + TSS region transcription start site region 143471