Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:28589768-28789778

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Opfaq5 17 25731951 to 28773124 3041173 QTL open field activity QTL 5
Srpk1 17 28589590 to 28622647 33057 - protein coding gene serine/arginine-rich protein specific kinase 1
Tssr147142 17 28603559 to 28603561 2 - TSS region transcription start site region 147142
Cpgi8893 17 28621349 to 28622964 1615 CpG island CpG island 8893
Tssr147143 17 28622066 to 28622081 15 - TSS region transcription start site region 147143
Tssr147144 17 28622085 to 28622102 17 - TSS region transcription start site region 147144
Tssr147145 17 28622419 to 28622473 54 - TSS region transcription start site region 147145
Tssr147146 17 28622479 to 28622502 23 - TSS region transcription start site region 147146
Tssr143451 17 28627466 to 28627467 1 + TSS region transcription start site region 143451
Slc26a8 17 28637783 to 28690233 52450 - protein coding gene solute carrier family 26, member 8
Hbnr2 17 28666997 to 28667145 148 QTL Heligmosomoides bakeri nematode resistance 2
D17Mit29 17 28666997 to 28667145 148 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 29
Cpgi8894 17 28684655 to 28684829 174 CpG island CpG island 8894
Cpgi8895 17 28689369 to 28690020 651 CpG island CpG island 8895
Tssr147147 17 28689758 to 28689764 6 - TSS region transcription start site region 147147
Tssr147148 17 28689768 to 28689778 10 - TSS region transcription start site region 147148
Tssr147149 17 28689783 to 28689831 48 - TSS region transcription start site region 147149
Cpgi8896 17 28690753 to 28692623 1870 CpG island CpG island 8896
Tssr147150 17 28691145 to 28691182 37 - TSS region transcription start site region 147150
Tssr147151 17 28691219 to 28691234 15 - TSS region transcription start site region 147151
Tssr143452 17 28691328 to 28691333 5 + TSS region transcription start site region 143452
Mapk14 17 28691342 to 28748405 57063 + protein coding gene mitogen-activated protein kinase 14
Tssr143453 17 28691388 to 28691399 11 + TSS region transcription start site region 143453
Tssr143454 17 28691419 to 28691445 26 + TSS region transcription start site region 143454
Tssr143455 17 28691462 to 28691471 9 + TSS region transcription start site region 143455
Tssr143456 17 28691790 to 28691825 35 + TSS region transcription start site region 143456
Tssr143457 17 28692270 to 28692300 30 + TSS region transcription start site region 143457
Tssr143458 17 28692592 to 28692616 24 + TSS region transcription start site region 143458
Tssr143459 17 28692618 to 28692651 33 + TSS region transcription start site region 143459
5830454J16Rik 17 28695101 to 28695739 638 unclassified gene RIKEN cDNA 5830454J16 gene
Tssr143460 17 28699614 to 28699618 4 + TSS region transcription start site region 143460
Gm4356 17 28726226 to 28726704 478 + pseudogene predicted gene 4356
Tssr143461 17 28746014 to 28746030 16 + TSS region transcription start site region 143461
Tssr143462 17 28747432 to 28747457 25 + TSS region transcription start site region 143462
Tssr143463 17 28747601 to 28747613 12 + TSS region transcription start site region 143463
Cpgi8897 17 28769053 to 28770306 1253 CpG island CpG island 8897
Mapk13 17 28769315 to 28778704 9389 + protein coding gene mitogen-activated protein kinase 13
Tssr143464 17 28769327 to 28769376 49 + TSS region transcription start site region 143464
Tssr143465 17 28769382 to 28769385 3 + TSS region transcription start site region 143465
Tssr143466 17 28769741 to 28769783 42 + TSS region transcription start site region 143466
Tssr147152 17 28770232 to 28770255 23 - TSS region transcription start site region 147152
Tssr147153 17 28770270 to 28770280 10 - TSS region transcription start site region 147153
Tssr143467 17 28786060 to 28786064 4 + TSS region transcription start site region 143467