Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:28512720-28535398

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr5055	17	28513971 to 28514009	38	+	TSS region	transcription start site region 5055
Tssr147132	17	28515533 to 28515538	5	-	TSS region	transcription start site region 147132
Tssr147133	17	28517491 to 28517504	13	-	TSS region	transcription start site region 147133
Tssr147134	17	28517509 to 28517558	49	-	TSS region	transcription start site region 147134
Cpgi8888	17	28517729 to 28518553	824		CpG island	CpG island 8888
Gm49861	17	28520008 to 28520250	242	+	pseudogene	predicted gene, 49861
Gm20109	17	28522381 to 28523148	767	-	lincRNA gene	predicted gene, 20109
Cpgi8889	17	28522585 to 28523845	1260		CpG island	CpG island 8889
E230001N04Rik	17	28522720 to 28525398	2678	+	lincRNA gene	RIKEN cDNA E230001N04 gene
Tssr143434	17	28522722 to 28522761	39	+	TSS region	transcription start site region 143434
Tssr143435	17	28523275 to 28523314	39	+	TSS region	transcription start site region 143435
Tssr143436	17	28523318 to 28523327	9	+	TSS region	transcription start site region 143436
Gm25195	17	28526332 to 28526457	125	+	miRNA gene	predicted gene, 25195
Gm41506	17	28528743 to 28530734	1991	-	bidirectional promoter lncRNA gene	predicted gene, 41506
Tssr143437	17	28530828 to 28530833	5	+	TSS region	transcription start site region 143437
Tssr143438	17	28530834 to 28530879	45	+	TSS region	transcription start site region 143438
Armc12	17	28530861 to 28538975	8114	+	protein coding gene	armadillo repeat containing 12
Tssr143439	17	28532171 to 28532201	30	+	TSS region	transcription start site region 143439
Cpgi8890	17	28533479 to 28533671	192		CpG island	CpG island 8890