MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:28374723-28476430

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi8884	17	28375582 to 28375857	275		CpG island	CpG island 8884
Cpgi8885	17	28386277 to 28386735	458		CpG island	CpG island 8885
Cpgi8886	17	28391761 to 28392002	241		CpG island	CpG island 8886
Fkbp5	17	28398753 to 28486149	87396	-	protein coding gene	FK506 binding protein 5
Tssr143432	17	28412475 to 28412477	2	+	TSS region	transcription start site region 143432
6030422H21Rik	17	28420071 to 28424390	4319		unclassified gene	RIKEN cDNA 6030422H21 gene
Gm49838	17	28424723 to 28426430	1707	-	sense intronic lncRNA gene	predicted gene, 49838
Tssr147115	17	28438032 to 28438047	15	-	TSS region	transcription start site region 147115
Tssr147116	17	28438050 to 28438061	11	-	TSS region	transcription start site region 147116
Tssr147117	17	28441374 to 28441387	13	-	TSS region	transcription start site region 147117
Tssr147118	17	28441689 to 28441706	17	-	TSS region	transcription start site region 147118
Tssr147119	17	28441718 to 28441732	14	-	TSS region	transcription start site region 147119
Gm22146	17	28446599 to 28455602	9003	+	antisense lncRNA gene	predicted gene, 22146
Gm49799	17	28446861 to 28447148	287	+	unclassified non-coding RNA gene	predicted gene, 49799
Tssr147120	17	28452029 to 28452034	5	-	TSS region	transcription start site region 147120
Tssr147121	17	28455648 to 28455651	3	-	TSS region	transcription start site region 147121
Gm49839	17	28457484 to 28461095	3611	-	unclassified gene	predicted gene, 49839
Tssr147122	17	28467272 to 28467276	4	-	TSS region	transcription start site region 147122