Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:28192754-28341469

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp523 17 28177129 to 28205886 28757 + protein coding gene zinc finger protein 523
Cpgi8871 17 28207676 to 28207997 321 CpG island CpG island 8871
Def6 17 28207778 to 28228608 20830 + protein coding gene differentially expressed in FDCP 6
Tssr143394 17 28207795 to 28207814 19 + TSS region transcription start site region 143394
Tssr143395 17 28207820 to 28207893 73 + TSS region transcription start site region 143395
Tssr143396 17 28208303 to 28208347 44 + TSS region transcription start site region 143396
D17Mit262 17 28208469 to 28208550 81 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 262
Tssr147098 17 28211547 to 28211553 6 - TSS region transcription start site region 147098
Tssr147099 17 28217724 to 28217735 11 - TSS region transcription start site region 147099
Tssr143397 17 28218213 to 28218217 4 + TSS region transcription start site region 143397
Tssr143398 17 28221746 to 28221748 2 + TSS region transcription start site region 143398
Tssr143399 17 28222213 to 28222218 5 + TSS region transcription start site region 143399
Gm49874 17 28223104 to 28224167 1063 - antisense lncRNA gene predicted gene, 49874
Cpgi8872 17 28223491 to 28224272 781 CpG island CpG island 8872
Tssr147100 17 28224152 to 28224167 15 - TSS region transcription start site region 147100
Cpgi8873 17 28225790 to 28226450 660 CpG island CpG island 8873
Tssr143400 17 28227067 to 28227071 4 + TSS region transcription start site region 143400
Cpgi8874 17 28232331 to 28233299 968 CpG island CpG island 8874
Tssr147101 17 28232539 to 28232562 23 - TSS region transcription start site region 147101
Tssr143401 17 28232723 to 28232789 66 + TSS region transcription start site region 143401
Ppard 17 28232754 to 28301469 68715 + protein coding gene peroxisome proliferator activator receptor delta
Tssr143402 17 28232794 to 28232829 35 + TSS region transcription start site region 143402
Tssr143403 17 28236925 to 28236968 43 + TSS region transcription start site region 143403
Tssr143404 17 28239123 to 28239124 1 + TSS region transcription start site region 143404
Tssr143405 17 28252538 to 28252581 43 + TSS region transcription start site region 143405
Tssr143406 17 28262116 to 28262126 10 + TSS region transcription start site region 143406
Tssr143407 17 28271687 to 28271737 50 + TSS region transcription start site region 143407
1810013A23Rik 17 28271708 to 28273163 1455 + lncRNA gene RIKEN cDNA 1810013A23 gene
Tssr143408 17 28271957 to 28271968 11 + TSS region transcription start site region 143408
Tssr143409 17 28272114 to 28272131 17 + TSS region transcription start site region 143409
Tssr143410 17 28272172 to 28272188 16 + TSS region transcription start site region 143410
Tssr143411 17 28272191 to 28272205 14 + TSS region transcription start site region 143411
9330112F22Rik 17 28276001 to 28285013 9012 unclassified gene RIKEN cDNA 9330112F22 gene
Tssr143412 17 28280231 to 28280254 23 + TSS region transcription start site region 143412
Tssr143413 17 28280282 to 28280291 9 + TSS region transcription start site region 143413
D17Aus7 17 28293269 to 28293448 179 DNA segment DNA segment, Chr 17, Austin 7
Tssr143414 17 28298338 to 28298361 23 + TSS region transcription start site region 143414
Tssr143415 17 28299658 to 28299669 11 + TSS region transcription start site region 143415
Tssr143416 17 28300049 to 28300067 18 + TSS region transcription start site region 143416
Tssr143417 17 28300218 to 28300232 14 + TSS region transcription start site region 143417
Cpgi8875 17 28313222 to 28314114 892 CpG island CpG island 8875
Tssr143418 17 28313513 to 28313580 67 + TSS region transcription start site region 143418
Fance 17 28313530 to 28326574 13044 + protein coding gene Fanconi anemia, complementation group E
Gm49886 17 28318186 to 28319602 1416 - antisense lncRNA gene predicted gene, 49886
Gm49889 17 28326953 to 28328521 1568 - bidirectional promoter lncRNA gene predicted gene, 49889
Cpgi8876 17 28327940 to 28329382 1442 CpG island CpG island 8876
Tssr143419 17 28328169 to 28328179 10 + TSS region transcription start site region 143419
Rpl10a 17 28328471 to 28331033 2562 + protein coding gene ribosomal protein L10A
Tssr143420 17 28328549 to 28328570 21 + TSS region transcription start site region 143420
Tssr143421 17 28328576 to 28328591 15 + TSS region transcription start site region 143421
Tssr143422 17 28328604 to 28328615 11 + TSS region transcription start site region 143422
Tssr143423 17 28328616 to 28328621 5 + TSS region transcription start site region 143423
Tssr143424 17 28328780 to 28328803 23 + TSS region transcription start site region 143424
Tssr143425 17 28329209 to 28329244 35 + TSS region transcription start site region 143425
Tssr143426 17 28329317 to 28329366 49 + TSS region transcription start site region 143426
Tssr143427 17 28329369 to 28329387 18 + TSS region transcription start site region 143427
Tssr143428 17 28329442 to 28329486 44 + TSS region transcription start site region 143428
Tssr143429 17 28329622 to 28329641 19 + TSS region transcription start site region 143429
Tssr143430 17 28330493 to 28330497 4 + TSS region transcription start site region 143430
Tead3 17 28331671 to 28350805 19134 - protein coding gene TEA domain family member 3
Cpgi8877 17 28332853 to 28333294 441 CpG island CpG island 8877
Tssr143431 17 28334944 to 28334948 4 + TSS region transcription start site region 143431
Cpgi8878 17 28341129 to 28341559 430 CpG island CpG island 8878