Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:28131551-28222952

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi8868 17 28133340 to 28133529 189 CpG island CpG island 8868
Gm49897 17 28139628 to 28140106 478 - unclassified gene predicted gene, 49897
Cpgi8869 17 28141247 to 28143138 1891 CpG island CpG island 8869
Scube3 17 28142141 to 28174854 32713 + protein coding gene signal peptide, CUB domain, EGF-like 3
Tssr143389 17 28142182 to 28142193 11 + TSS region transcription start site region 143389
Tssr143390 17 28142267 to 28142321 54 + TSS region transcription start site region 143390
Tssr143391 17 28147540 to 28147544 4 + TSS region transcription start site region 143391
C230013L11Rik 17 28174657 to 28177682 3025 - bidirectional promoter lncRNA gene RIKEN cDNA C230013L11 gene
Cpgi8870 17 28176551 to 28177952 1401 CpG island CpG island 8870
Zfp523 17 28177129 to 28205886 28757 + protein coding gene zinc finger protein 523
Tssr143392 17 28177130 to 28177214 84 + TSS region transcription start site region 143392
Tssr143393 17 28177396 to 28177449 53 + TSS region transcription start site region 143393
Tssr147097 17 28177641 to 28177682 41 - TSS region transcription start site region 147097
Cpgi8871 17 28207676 to 28207997 321 CpG island CpG island 8871
Def6 17 28207778 to 28228608 20830 + protein coding gene differentially expressed in FDCP 6
Tssr143394 17 28207795 to 28207814 19 + TSS region transcription start site region 143394
Tssr143395 17 28207820 to 28207893 73 + TSS region transcription start site region 143395
Tssr143396 17 28208303 to 28208347 44 + TSS region transcription start site region 143396
D17Mit262 17 28208469 to 28208550 81 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 262
Tssr147098 17 28211547 to 28211553 6 - TSS region transcription start site region 147098
Tssr147099 17 28217724 to 28217735 11 - TSS region transcription start site region 147099
Tssr143397 17 28218213 to 28218217 4 + TSS region transcription start site region 143397
Tssr143398 17 28221746 to 28221748 2 + TSS region transcription start site region 143398
Tssr143399 17 28222213 to 28222218 5 + TSS region transcription start site region 143399