Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:28030187-28130195

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Anks1 17 27909306 to 28062775 153469 + protein coding gene ankyrin repeat and SAM domain containing 1
Tssr143383 17 28040780 to 28040811 31 + TSS region transcription start site region 143383
Tssr143384 17 28040814 to 28040832 18 + TSS region transcription start site region 143384
Cpgi8864 17 28042323 to 28042612 289 CpG island CpG island 8864
Tcp11 17 28066745 to 28080639 13894 - protein coding gene t-complex protein 11
Tssr147082 17 28066834 to 28066863 29 - TSS region transcription start site region 147082
Tssr147083 17 28067008 to 28067014 6 - TSS region transcription start site region 147083
Tssr147084 17 28067087 to 28067097 10 - TSS region transcription start site region 147084
Tssr147085 17 28068473 to 28068501 28 - TSS region transcription start site region 147085
Tssr143385 17 28069617 to 28069642 25 + TSS region transcription start site region 143385
Tssr147086 17 28074692 to 28074712 20 - TSS region transcription start site region 147086
4930526A20Rik 17 28075110 to 28076402 1292 - pseudogene RIKEN cDNA 4930526A20 gene
Cpgi8865 17 28079637 to 28080959 1322 CpG island CpG island 8865
Tssr147087 17 28079747 to 28079775 28 - TSS region transcription start site region 147087
Tssr147088 17 28079799 to 28079809 10 - TSS region transcription start site region 147088
Tssr143386 17 28079880 to 28079897 17 + TSS region transcription start site region 143386
Tssr147089 17 28080060 to 28080100 40 - TSS region transcription start site region 147089
Tssr147090 17 28080115 to 28080139 24 - TSS region transcription start site region 147090
Tssr147091 17 28080144 to 28080170 26 - TSS region transcription start site region 147091
Tssr147092 17 28080187 to 28080195 8 - TSS region transcription start site region 147092
Tssr147093 17 28080272 to 28080279 7 - TSS region transcription start site region 147093
Tssr147094 17 28080305 to 28080316 11 - TSS region transcription start site region 147094
Tssr147095 17 28080569 to 28080589 20 - TSS region transcription start site region 147095
Tssr147096 17 28080595 to 28080639 44 - TSS region transcription start site region 147096
Cpgi8866 17 28084943 to 28085131 188 CpG island CpG island 8866
Tssr143387 17 28098016 to 28098018 2 + TSS region transcription start site region 143387
Cpgi8867 17 28105399 to 28105819 420 CpG island CpG island 8867
Tssr143388 17 28124037 to 28124044 7 + TSS region transcription start site region 143388
D17Mit226 17 28128659 to 28128772 113 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 226