Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:27955316-28075580

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Anks1 17 27909306 to 28062775 153469 + protein coding gene ankyrin repeat and SAM domain containing 1
Gm15597 17 27959615 to 27965316 5701 - antisense lncRNA gene predicted gene 15597
Tssr147080 17 27970108 to 27970117 9 - TSS region transcription start site region 147080
Tssr143373 17 27979066 to 27979090 24 + TSS region transcription start site region 143373
Gm49802 17 27982392 to 27983158 766 + sense intronic lncRNA gene predicted gene, 49802
Cpgi8861 17 27986116 to 27986453 337 CpG island CpG island 8861
Gm35290 17 28001065 to 28002362 1297 - antisense lncRNA gene predicted gene, 35290
Tssr143374 17 28007346 to 28007409 63 + TSS region transcription start site region 143374
Tssr143375 17 28007471 to 28007502 31 + TSS region transcription start site region 143375
Tssr143376 17 28007521 to 28007540 19 + TSS region transcription start site region 143376
Tssr143377 17 28007582 to 28007596 14 + TSS region transcription start site region 143377
Tssr143378 17 28007648 to 28007694 46 + TSS region transcription start site region 143378
Tssr143379 17 28007695 to 28007704 9 + TSS region transcription start site region 143379
Tssr143380 17 28007991 to 28008028 37 + TSS region transcription start site region 143380
Cpgi8862 17 28008194 to 28008379 185 CpG island CpG island 8862
Tssr143381 17 28008279 to 28008307 28 + TSS region transcription start site region 143381
Tssr147081 17 28008552 to 28008580 28 - TSS region transcription start site region 147081
Cpgi8863 17 28015316 to 28015580 264 CpG island CpG island 8863
Tssr143382 17 28022168 to 28022198 30 + TSS region transcription start site region 143382
Tssr143383 17 28040780 to 28040811 31 + TSS region transcription start site region 143383
Tssr143384 17 28040814 to 28040832 18 + TSS region transcription start site region 143384
Cpgi8864 17 28042323 to 28042612 289 CpG island CpG island 8864
Tcp11 17 28066745 to 28080639 13894 - protein coding gene t-complex protein 11
Tssr147082 17 28066834 to 28066863 29 - TSS region transcription start site region 147082
Tssr147083 17 28067008 to 28067014 6 - TSS region transcription start site region 147083
Tssr147084 17 28067087 to 28067097 10 - TSS region transcription start site region 147084
Tssr147085 17 28068473 to 28068501 28 - TSS region transcription start site region 147085
Tssr143385 17 28069617 to 28069642 25 + TSS region transcription start site region 143385
Tssr147086 17 28074692 to 28074712 20 - TSS region transcription start site region 147086
4930526A20Rik 17 28075110 to 28076402 1292 - pseudogene RIKEN cDNA 4930526A20 gene