Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:27827328-27988159

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi8857 17 27839895 to 27840445 550 CpG island CpG island 8857
Tssr143362 17 27840057 to 27840119 62 + TSS region transcription start site region 143362
Snrpc 17 27840087 to 27851968 11881 + protein coding gene U1 small nuclear ribonucleoprotein C
Tssr143363 17 27840125 to 27840143 18 + TSS region transcription start site region 143363
Tssr143364 17 27840156 to 27840177 21 + TSS region transcription start site region 143364
Tssr143365 17 27840203 to 27840214 11 + TSS region transcription start site region 143365
Tssr143366 17 27847969 to 27847983 14 + TSS region transcription start site region 143366
Cpgi8858 17 27856230 to 27857397 1167 CpG island CpG island 8858
Tssr143367 17 27856443 to 27856511 68 + TSS region transcription start site region 143367
Uhrf1bp1 17 27856507 to 27900040 43533 + protein coding gene UHRF1 (ICBP90) binding protein 1
Tssr143368 17 27856520 to 27856544 24 + TSS region transcription start site region 143368
Tssr143369 17 27857240 to 27857247 7 + TSS region transcription start site region 143369
Gm49803 17 27868481 to 27868978 497 - pseudogene predicted gene, 49803
Taf11 17 27901128 to 27909242 8114 - protein coding gene TATA-box binding protein associated factor 11
Tssr147074 17 27904631 to 27904637 6 - TSS region transcription start site region 147074
Cpgi8859 17 27907328 to 27908159 831 CpG island CpG island 8859
Tssr147075 17 27907706 to 27907770 64 - TSS region transcription start site region 147075
Gm49801 17 27907803 to 27908349 546 + antisense lncRNA gene predicted gene, 49801
Tssr143370 17 27907855 to 27907867 12 + TSS region transcription start site region 143370
Cpgi8860 17 27908575 to 27910188 1613 CpG island CpG island 8860
Tssr147076 17 27909110 to 27909146 36 - TSS region transcription start site region 147076
Tssr147077 17 27909206 to 27909264 58 - TSS region transcription start site region 147077
Tssr143371 17 27909287 to 27909314 27 + TSS region transcription start site region 143371
Anks1 17 27909306 to 28062775 153469 + protein coding gene ankyrin repeat and SAM domain containing 1
Tssr143372 17 27909337 to 27909409 72 + TSS region transcription start site region 143372
Tssr147078 17 27909646 to 27909658 12 - TSS region transcription start site region 147078
Tssr147079 17 27910200 to 27910249 49 - TSS region transcription start site region 147079
Tssr5054 17 27935115 to 27935124 9 - TSS region transcription start site region 5054
Gm15597 17 27959615 to 27965316 5701 - antisense lncRNA gene predicted gene 15597
Tssr147080 17 27970108 to 27970117 9 - TSS region transcription start site region 147080
Tssr143373 17 27979066 to 27979090 24 + TSS region transcription start site region 143373
Gm49802 17 27982392 to 27983158 766 + sense intronic lncRNA gene predicted gene, 49802
Cpgi8861 17 27986116 to 27986453 337 CpG island CpG island 8861